PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01653.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRF
Protein Properties Length: 349aa    MW: 38639.5 Da    PI: 8.6938
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01653.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC61.21.6e-19128170143
               WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrksk 43 
                       d+epgrC+RtDG+kWRCs+ vl+ +k+CErH+ rgr r ++s 
  Migut.B01653.1.p 128 DTEPGRCKRTDGRKWRCSKSVLPHQKYCERHMYRGRGRGSSST 170
                       689**********************************988875 PP
2WRC60.13.6e-19241276338
               WRC   3 epgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsr 38 
                       +p rCrRtDGKkW C+r+vl+++k+C+ H+hrg +r
  Migut.B01653.1.p 241 SPQRCRRTDGKKWQCRRDVLPNQKYCQVHMHRGAKR 276
                       689******************************987 PP
3QLQ26.61.9e-1065100136
               QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 
                       s F+aaQ+++L +Qi +  ++++++PvP ++ + ++
  Migut.B01653.1.p  65 SIFSAAQFNELCNQIHIWNLINSGLPVPFHIWMSVF 100
                       68****************************988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009510.002665101IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088805.9E-76699IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166720.821128175IPR014977WRC domain
PfamPF088795.3E-17130167IPR014977WRC domain
PROSITE profilePS5166719.885239283IPR014977WRC domain
PfamPF088793.3E-16242276IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MYLLPMHSQL LLPTTAAPPP GNEDDDGCSL REDSGERINL ELGIGRCGLI ADEIIKIKQE  60
NKLDSIFSAA QFNELCNQIH IWNLINSGLP VPFHIWMSVF TSFGPSICNT YPNSFCTKSC  120
DHTSSEMDTE PGRCKRTDGR KWRCSKSVLP HQKYCERHMY RGRGRGSSST RKHTSTPTEG  180
VRTSDENIDG LSAIQTAISA QNMTYMEQRN GVFGSSPKSV LRDCAGKVNL ELGSKGNTVT  240
SPQRCRRTDG KKWQCRRDVL PNQKYCQVHM HRGAKRLVLN PESSRKVPEG STRIARISCT  300
SLGNNINLNT VPASPHRHVT ENNSTSSSTS DATTITDENI SSCLKNSF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01653.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843978.10.0PREDICTED: growth-regulating factor 9 isoform X2
TrEMBLA0A022QZN51e-138A0A022QZN5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA77981922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.14e-19growth-regulating factor 2