PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01169.1.p
Common NameLOC105969760, MIMGU_mgv1a011529mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 279aa    MW: 32236.9 Da    PI: 10.037
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01169.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.64.2e-1718108197
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       ffkv+     l s++l++p +f+ ++ +  +    ++l+d + g+ W v +  ++++++ ++l++GW +Fv+ ++L  g+f+vFk+d+  + +
  Migut.B01169.1.p  18 FFKVF--LPDLHSQQLMIPPDFI-TYFSR-TIRERVILKDaTGGKIWHVSV--DQNRDGeFFLKNGWPSFVSHHRLTLGEFLVFKYDK--CYS 102
                       78888..77888899********.56333.34457*****5666*******..6666555*************************976..444 PP

                       .EEEEE CS
                B3  92 lvvkvf 97 
                       ++vk++
  Migut.B01169.1.p 103 FLVKIY 108
                       488875 PP
2B333.95.7e-111862691599
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgr.sefelvvkvfrk 99 
                       +l +p   +++h+ +++e+ +++++d +g++W+v++  + k+gr++++kG ++F  +n+L   +D + F++  + s++  +v v+r+
  Migut.B01169.1.p 186 NLLIPGLLFKRHN-VHTEP-EMVMRDAKGNEWDVQI-GTSKDGRVYIGKGFSQFRVDNKLVpPKDRCKFTFGAEnSSRIIRVEVLRH 269
                       5889999999996.44555.8***************.5777778*****************99*******98666888788887775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.55E-2012113IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.2E-1812113IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.09816111IPR003340B3 DNA binding domain
PfamPF023623.5E-1418108IPR003340B3 DNA binding domain
CDDcd100177.41E-1418108No hitNo description
SMARTSM010195.1E-1518111IPR003340B3 DNA binding domain
SuperFamilySSF1019362.94E-11169256IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.2E-11169261IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508637.711172270IPR003340B3 DNA binding domain
SMARTSM010190.17175265IPR003340B3 DNA binding domain
PfamPF023623.0E-8186268IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MGKRGRRKKI VSSEDAEFFK VFLPDLHSQQ LMIPPDFITY FSRTIRERVI LKDATGGKIW  60
HVSVDQNRDG EFFLKNGWPS FVSHHRLTLG EFLVFKYDKC YSFLVKIYGI NGCKRDVFAA  120
NHDIITARVK VEEENYAEEE INAAKQQTNS GKRARPPRYT ETEVSLENSS ECPFFISNLT  180
RPSQYNLLIP GLLFKRHNVH TEPEMVMRDA KGNEWDVQIG TSKDGRVYIG KGFSQFRVDN  240
KLVPPKDRCK FTFGAENSSR IIRVEVLRHV PPRKKSRC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01169.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849992.10.0PREDICTED: putative B3 domain-containing protein At5g66980
TrEMBLA0A022QH620.0A0A022QH62_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37792244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.15e-19B3 family protein