PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01168.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 281aa    MW: 32494 Da    PI: 8.8771
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01168.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.61.4e-15521331499
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       +  ++p +f+e++gg+   + t+tl+ + g s++  ++    ++  +++kGW eFvk+n ++e Df++F++ g+  f  +vkvf+k
  Migut.B01168.1.p  52 NFHRIPPDFIEKFGGN--IPETVTLKKTPGISFQADINRIDDDDDWFIEKGWPEFVKENSVEESDFLIFTYAGNAVF--NVKVFSK 133
                       4458*********999..6679***************66555555899************************99888..9999997 PP
2B356.45.4e-18186276396
                       EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                       +v ++++  ++g+l +p +f ++h g +k++ +++t    + +sW+v +  + ks r v++kGW +Fv +n L++g +++F+l+++ ++   v
  Migut.B01168.1.p 186 SVKLKKSCVTRGWLHIPSEFWRTHlGADKRGLRMVT-LKVKEKSWKVGI--TSKSFRAVFSKGWGKFVIDNSLRTGNSCMFMLIHDgHDL--V 273
                       455677888899************877776655555.55699*******..*********************************975555..6 PP

                       EEE CS
                B3  94 vkv 96 
                       +kv
  Migut.B01168.1.p 274 FKV 276
                       665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100175.25E-929132No hitNo description
Gene3DG3DSA:2.40.330.101.8E-1729136IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.22E-1829136IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.81539134IPR003340B3 DNA binding domain
SMARTSM010199.7E-1147134IPR003340B3 DNA binding domain
PfamPF023622.2E-1254133IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.9E-18182278IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-18182276IPR015300DNA-binding pseudobarrel domain
CDDcd100171.20E-15183278No hitNo description
PROSITE profilePS5086312.111184280IPR003340B3 DNA binding domain
SMARTSM010194.7E-12185280IPR003340B3 DNA binding domain
PfamPF023622.8E-16185276IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MDRRGRGRPK KIASDNFDQI PVKRGEDLPE FFKIYVPAIY SERLVNFQKK INFHRIPPDF  60
IEKFGGNIPE TVTLKKTPGI SFQADINRID DDDDWFIEKG WPEFVKENSV EESDFLIFTY  120
AGNAVFNVKV FSKNGCIKRV DNLPEDEPSE FEPESENSED NQSEERNLSP RRPSERETVC  180
GNRYFSVKLK KSCVTRGWLH IPSEFWRTHL GADKRGLRMV TLKVKEKSWK VGITSKSFRA  240
VFSKGWGKFV IDNSLRTGNS CMFMLIHDGH DLVFKVLIDK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01168.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849940.12e-91PREDICTED: putative B3 domain-containing protein Os03g0621600
TrEMBLA0A022QI391e-120A0A022QI39_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA126331320
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.18e-14B3 family protein