PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00481.1.p
Common NameMIMGU_mgv1a023082mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 351aa    MW: 38040.1 Da    PI: 5.856
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00481.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.13.7e-213280149
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      ++ien++n qvtfskRr+g++KKA+ELS+LC+ae  +++fs+ +k + y
  Migut.B00481.1.p 32 EKIENETNLQVTFSKRRAGLFKKASELSTLCGAESGIVVFSPGDKPHSY 80
                      57***************************************99887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004325.3E-322483IPR002100Transcription factor, MADS-box
PROSITE profilePS5006624.7962484IPR002100Transcription factor, MADS-box
CDDcd002652.51E-352592No hitNo description
SuperFamilySSF554554.06E-272598IPR002100Transcription factor, MADS-box
PRINTSPR004047.6E-192646IPR002100Transcription factor, MADS-box
PfamPF003192.2E-243380IPR002100Transcription factor, MADS-box
PRINTSPR004047.6E-194661IPR002100Transcription factor, MADS-box
PRINTSPR004047.6E-196182IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MNPSDQNNNP GENSNNPNPQ RKGKGRQKIK MEKIENETNL QVTFSKRRAG LFKKASELST  60
LCGAESGIVV FSPGDKPHSY GNPSVNAVVD RFLNLNPNPN PNPNPIPGSE ADRLEREVAA  120
RAEADMRRRN KAVGKWEADL KIEKERKKAH EKLRKAPESE RWRPPNFDDL NYQQLDELKR  180
SILDFQQSLD NKLDQDEAAS LAALDNTNIQ GPSNNNAPLI QGPINNNAPL IQGPINNNAP  240
LIVQGGPLNI PPAQFVGGVG TSNNPGANAA FGPPFLPGYA PIYPTVNNNL PFEFPYNYGN  300
LGEIVGQPNV GVGGSGVDAE GNPGEMQPNN NVQNMPPGFD GNYGHGNYFP *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00481.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836715.10.0PREDICTED: agamous-like MADS-box protein AGL61
TrEMBLA0A022RF710.0A0A022RF71_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1979523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-30AGAMOUS-like 61