PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.B00334.1.p | ||||||||
Common Name | LOC105957567, MIMGU_mgv1a014607mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | B3 | ||||||||
Protein Properties | Length: 187aa MW: 21199.1 Da PI: 8.9573 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.8 | 1.7e-17 | 88 | 177 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v+ +l lp +f+++h k ++ ++ l de+g+++ k+ k++ l++GW++F+ +++L +gD +vF+l++r++f + Migut.B00334.1.p 88 FVKPMLQSHVTGGFWLGLPVHFCNKHLPK--SDEMMDLVDEEGEVFPTKYLALKRG----LSGGWRGFAIDHELVDGDALVFQLTDRTTF--K 172 89*********************999433..5569***************666665....9**********************9988888..8 PP EEEE- CS B3 94 vkvfr 98 v ++r Migut.B00334.1.p 173 VYIIR 177 88877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 3.53E-24 | 82 | 179 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.6E-20 | 82 | 178 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 9.49E-26 | 86 | 177 | No hit | No description |
Pfam | PF02362 | 5.6E-16 | 88 | 177 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.928 | 88 | 179 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 5.5E-21 | 88 | 179 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MKKVKPRVPK QPLDLSAVRR SNRVADLPPR TYKENLSVVP MGRARSYSSG RRRDLSNRVY 60 ASDEDRAYAI ERAEELESRL DKDNMPVFVK PMLQSHVTGG FWLGLPVHFC NKHLPKSDEM 120 MDLVDEEGEV FPTKYLALKR GLSGGWRGFA IDHELVDGDA LVFQLTDRTT FKVYIIRVND 180 SGESSD* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.B00334.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836952.1 | 1e-136 | PREDICTED: B3 domain-containing protein At3g19184 isoform X1 | ||||
Swissprot | Q69V36 | 8e-66 | Y6944_ORYSJ; B3 domain-containing protein Os06g0194400 | ||||
TrEMBL | A0A022RCB4 | 1e-122 | A0A022RCB4_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1628 | 23 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 3e-67 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.B00334.1.p |
Entrez Gene | 105957567 |
Publications ? help Back to Top | |||
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