PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00331.1.p
Common NameMIMGU_mgv1a008064mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 398aa    MW: 44699.8 Da    PI: 6.4085
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00331.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.64.2e-1750139198
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k+l++s+ + +  l lpkkf+++h  ++ +   ++l de+ ++++ k+++rk++    l++GW++F  +++L egD +vF+l++  +f  +
  Migut.B00331.1.p  50 FLKQLLKSHLSGKFYLGLPKKFCDAHLPSHDG--SIILVDENDQEYNTKYSVRKNR----LSGGWRGFSIEHKLLEGDALVFHLIEPCKF--R 134
                       89************************433334..6***************777777....************************998888..7 PP

                       EEEE- CS
                B3  94 vkvfr 98 
                       v ++r
  Migut.B00331.1.p 135 VYIVR 139
                       77776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019367.46E-2346140IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.3E-1946140IPR015300DNA-binding pseudobarrel domain
CDDcd100175.51E-2748139No hitNo description
PfamPF023621.2E-1450139IPR003340B3 DNA binding domain
SMARTSM010193.3E-2250141IPR003340B3 DNA binding domain
PROSITE profilePS5086312.68950141IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MNEVMVLLLP SNEITISTTA DPDGCLNVNS SALDQAKGIQ ANSFEQFPSF LKQLLKSHLS  60
GKFYLGLPKK FCDAHLPSHD GSIILVDEND QEYNTKYSVR KNRLSGGWRG FSIEHKLLEG  120
DALVFHLIEP CKFRVYIVRA GKITENEGAI GLQTYDFQNI KPISAVKMED QMEENACTGK  180
TARQVYLNSL EVVDSHHETK KARLTPDSEI HMHHSANSID QFKDISGFEN FKIQSGGLIL  240
DSEIPKNIRA KYYNLCCSQR MFLHDHLING LSTKLAVVMI SETTNISEAV RSADVSTSLH  300
HLECWEKTLK AFEDLGMAVG FIRNRLHKLL EISREAQSNN ESKMTVKTQA DHVSGNLETS  360
SLNVEALIGS LEAEIESLRW KNEKLGFEFR ELARAPW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00331.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836957.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X2
TrEMBLA0A022RBI90.0A0A022RBI9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30232343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-35B3 family protein