PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.B00028.1.p | ||||||||
Common Name | LOC105957455, MIMGU_mgv1a011510mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 280aa MW: 31967.5 Da PI: 7.0642 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 146.5 | 1.5e-45 | 13 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pGfrFhPt+eel+++yLk v +kkl+ +++i ++iy+++P++Lp +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++ Migut.B00028.1.p 13 LPGFRFHPTEEELLTFYLKTMVFAKKLPGgADIIGFLNIYNHHPRELPGLAKIGEREWYFFVPRDRKHGSGGRPNRTTENGFWKATGSDRQIH 105 59************************77625668889***********8888899*************************************9 PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ glkktLvfy+grap+g+ktdWvm+e+rl Migut.B00028.1.p 106 TTsdPKKVLGLKKTLVFYEGRAPRGTKTDWVMNEFRL 142 98767788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.83E-53 | 6 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.437 | 12 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-24 | 14 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
MSMDESRSCE VNLPGFRFHP TEEELLTFYL KTMVFAKKLP GGADIIGFLN IYNHHPRELP 60 GLAKIGEREW YFFVPRDRKH GSGGRPNRTT ENGFWKATGS DRQIHTTSDP KKVLGLKKTL 120 VFYEGRAPRG TKTDWVMNEF RLPDKCSPPK DIVLCKIYRK ATSLKVLEYR AAVEEDDETK 180 SDTNCSSLSP PPMDCMLSFC NQFEEINNIQ VLKKENEEIL LHVKESSKVK GCSSIVLPNG 240 SDNIAELQVP KFNTDWTQDS FWTQFSPWLD NFAPFLPMC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-43 | 1 | 160 | 1 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.B00028.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836830.1 | 0.0 | PREDICTED: NAC transcription factor 29 | ||||
Swissprot | Q10S65 | 9e-84 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A022RE46 | 0.0 | A0A022RE46_ERYGU; Uncharacterized protein | ||||
STRING | Migut.B00028.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-101 | NAC domain containing protein 36 |
Link Out ? help Back to Top | |
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Phytozome | Migut.B00028.1.p |
Entrez Gene | 105957455 |
Publications ? help Back to Top | |||
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