PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A01160.1.p
Common NameLOC105948604, MIMGU_mgv1a012614mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 246aa    MW: 27353.4 Da    PI: 4.9073
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A01160.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-19124174255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp  +g   r++lg+f ta eAa+a+++a+ k++g
  Migut.A01160.1.p 124 HYRGVRRRP-WGKYAAEIRDPARRG--SRVWLGTFETAAEAARAYDRAAFKMRG 174
                       7********.**********95443..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-32123183IPR001471AP2/ERF domain
PROSITE profilePS5103224.803124182IPR001471AP2/ERF domain
SMARTSM003802.6E-36124188IPR001471AP2/ERF domain
CDDcd000184.68E-29124182No hitNo description
SuperFamilySSF541712.03E-23124184IPR016177DNA-binding domain
PfamPF008478.9E-14124174IPR001471AP2/ERF domain
PRINTSPR003676.6E-11125136IPR001471AP2/ERF domain
PRINTSPR003676.6E-11148164IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MANPDEVSTI ERISIYLLGE FSPRDLDNGA AAAAAATSFT DSPASCSESD LLSDSRLSIS  60
DYFFDFEEND RSVIDLTTPR SKPSLRIQVP AVAAVKKFEW IEFRESGEGN SVVEKVEEGE  120
EERHYRGVRR RPWGKYAAEI RDPARRGSRV WLGTFETAAE AARAYDRAAF KMRGSKAILN  180
FPLEIQRAAD EAGGKRRREE EEVAGDNGTK TVKYETSVKC EMGGEWGPLT PSFWQLSPHH  240
PILIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-30123186467ATERF1
3gcc_A1e-30123186467ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A01160.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827277.11e-180PREDICTED: ethylene-responsive transcription factor 5-like
TrEMBLA0A022PTY61e-178A0A022PTY6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9632389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.16e-17ethylene responsive element binding factor 6