PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00716.1.p
Common NameMIMGU_mgv1a020274mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 191aa    MW: 21630.2 Da    PI: 8.9654
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00716.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.6e-31111169159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+++r+++d+++v++tYeg Hnh+
  Migut.A00716.1.p 111 LDDGYKWRKYGQKSVKNSIHPRSYYRCTHHTCNVKKQIQRQTKDTTIVVTTYEGIHNHP 169
                       59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-3299169IPR003657WRKY domain
SuperFamilySSF1182902.22E-27104170IPR003657WRKY domain
PROSITE profilePS5081128.667106171IPR003657WRKY domain
SMARTSM007745.2E-35111170IPR003657WRKY domain
PfamPF031068.8E-25112169IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MEGDNNNFPY FFASSNSFPL STSSNINDSN SNVVMENSMQ NSQFSTFDHG QIDLARLLCG  60
AGPLEETTPV SLNIGEVDGD SSCRNKSRFG RKKKNIPARV AFHTRSAEDI LDDGYKWRKY  120
GQKSVKNSIH PRSYYRCTHH TCNVKKQIQR QTKDTTIVVT TYEGIHNHPC EKLMETLSPL  180
LKQLQFLSRF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-2598168171WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00716.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854206.11e-143PREDICTED: probable WRKY transcription factor 43
SwissprotQ8VWQ44e-55WRK56_ARATH; Probable WRKY transcription factor 56
TrEMBLA0A022QA721e-142A0A022QA72_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.A00716.1.p1e-142(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63742433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64000.16e-57WRKY DNA-binding protein 56