PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.A00323.2.p | ||||||||
Common Name | MIMGU_mgv1a011183mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | CPP | ||||||||
Protein Properties | Length: 230aa MW: 25869.3 Da PI: 6.8984 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 25 | 3.7e-08 | 136 | 174 | 4 | 42 |
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 gC Ck +Cl +C Cf +++Cs++C+C +C+N+e++ Migut.A00323.2.p 136 CGCDCKENHCLGFWCTCFRTKEFCSKKCTCRECCNNEKH 174 58**********************************986 PP | |||||||
2 | TCR | 20.9 | 7.1e-07 | 186 | 223 | 2 | 39 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +++ C+Ck C C C+a ++ C e+C Ce+C+N Migut.A00323.2.p 186 QEEICSCKTGLCTTDLCYCHAYKRGCWEDCDCEGCSNI 223 5678********************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 0.0068 | 13 | 52 | IPR033467 | Tesmin/TSO1-like CXC domain |
SMART | SM01114 | 0.012 | 133 | 174 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 15.532 | 134 | 225 | IPR005172 | CRC domain |
Pfam | PF03638 | 5.0E-5 | 137 | 172 | IPR005172 | CRC domain |
SMART | SM01114 | 7.0E-4 | 185 | 226 | IPR033467 | Tesmin/TSO1-like CXC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MENPIMKQGQ SSTHFTHCNC GEYCTKFCVC VAYDKFCGES CPCKDCWNTP RNIVEVLRRR 60 IETQNMIHQS LERKCAEFAV EIASSNEDNK KTESDALVSE DSSDDNNNTA SSNSLFESPT 120 KRAKTSASSI GVLVQCGCDC KENHCLGFWC TCFRTKEFCS KKCTCRECCN NEKHKEKVMM 180 SRAIKQEEIC SCKTGLCTTD LCYCHAYKRG CWEDCDCEGC SNIYGSKPK* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.A00323.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012855879.1 | 4e-85 | PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X1 | ||||
TrEMBL | A0A022Q443 | 1e-166 | A0A022Q443_ERYGU; Uncharacterized protein | ||||
STRING | Migut.A00323.1.p | 1e-138 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 2e-09 | Tesmin/TSO1-like CXC domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.A00323.2.p |