PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.17G091800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 293aa    MW: 32358.3 Da    PI: 7.8634
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.17G091800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.94.6e-331972255
              G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         prlrWtpeLH++Fv+a+e+LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+
  Manes.17G091800.1.p 19 PRLRWTPELHQCFVRAIERLGGQDKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72
                         8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.9581575IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.8E-321576IPR009057Homeodomain-like
SuperFamilySSF466892.51E-161774IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-241972IPR006447Myb domain, plants
PfamPF002493.0E-92071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MGSCGRSGTV RQYIRSKVPR LRWTPELHQC FVRAIERLGG QDKATPKLVL QLMDVKGLTI  60
SHVKSHLQMY RSMRSDLGRQ DRGFTHQRRR SVEDHDGCVD EVKLIEESDS HFICSPISLK  120
RARIETTSSI SDQNLQCSQG ICEIVTNPYS ADDYMGIKEG NGGGFRWEQT HSKSKATAFS  180
LPHDLCSLKS FKYAVEESNF LKIAKQDHGK GKSEASRSGR TEDEEGGDCC ELSLLLSLPH  240
ASSQRSNASC TSEISEAFSS YVDNRSTLKE CSGSSSGKHN INLDLSIALC GT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A9e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B9e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C9e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D9e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.17G091800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021598494.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A2C9U8370.0A0A2C9U837_MANES; Uncharacterized protein
STRINGcassava4.1_013039m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.17e-35G2-like family protein