PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.16G111000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | ERF | ||||||||
Protein Properties | Length: 296aa MW: 32355.6 Da PI: 5.872 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 85 | 135 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g Manes.16G111000.1.p 85 PVYRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALSIKG 135 68*****998.**********854...59**********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.6E-12 | 85 | 135 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-31 | 86 | 144 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.2E-36 | 86 | 149 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.051 | 86 | 143 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.55E-21 | 86 | 144 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 5.3E-10 | 87 | 98 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.20E-31 | 87 | 145 | No hit | No description |
PRINTS | PR00367 | 5.3E-10 | 109 | 125 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MLKLHLLSTK MADTMRVNSS PETETESSFN SSPPPPPPPH HHHHHHQPPP CSPSSSGLSP 60 NPKRNPDPEE NPGNPKRARD NSKHPVYRGV RMRTWGKWVS EIREPRKKNR IWLGTFSTPE 120 MAARAHDVAA LSIKGNSAIL NFPELASSLP RPASNSPRDV QAAAAKAASM DINISNSNND 180 DHPNHDNNCT RNNNASSSST LTQSSSSSTA EVTSSPCDVA SPDELSEIVE LPSLGSIFEE 240 SPELSDEFVF GDPWLYNLPW YEDYCGGSGY ISDNHLPVMP ESVITSSFDV FLWGN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 4e-19 | 81 | 143 | 9 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.16G111000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021596791.1 | 0.0 | ethylene-responsive transcription factor TINY-like | ||||
Swissprot | Q9LYD3 | 8e-57 | DREB3_ARATH; Dehydration-responsive element-binding protein 3 | ||||
TrEMBL | A0A2C9UAN0 | 0.0 | A0A2C9UAN0_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_029028m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF192 | 34 | 263 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 6e-55 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.16G111000.1.p |
Publications ? help Back to Top | |||
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