PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.15G140900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 301aa MW: 33697.8 Da PI: 7.9901 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.5 | 3.1e-33 | 19 | 72 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+e+LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ Manes.15G140900.1.p 19 PRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.47 | 15 | 75 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.2E-32 | 15 | 76 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.76E-16 | 17 | 74 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.9E-24 | 19 | 72 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 8.0E-9 | 20 | 71 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MGSCGRSGTV RQYIRSKVPR LRWTPELHHC FVHAIERLGG QDKATPKLVL QLMDVKGLTI 60 SHVKSHLQMY RSMRSDLGKQ DKSSTHQRRQ SFEDHDGCVD EIKPIEESDS HFIYSTIPSK 120 RARIETRSSI SDQNLQCSQG ICETVTNPYS LDDYMRMKEG NGGGFRWEQT HSKPEPTAFS 180 LPHDLCSLNT FNYAVEESDF LKIAKQEQGK CKLESHIWKP EATRSRRRRR EDEEEGRGGS 240 GSGCCELSLS LSLPCPSSCT SEMSEAFSSY VSRSIFKDCS GSASGKRSVN LDLSIALCGT 300 * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 5e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 5e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 5e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 5e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.15G140900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021593546.1 | 0.0 | putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A2C9UG37 | 0.0 | A0A2C9UG37_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_029048m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5539 | 33 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14600.1 | 5e-35 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.15G140900.1.p |