PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G173600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 412aa    MW: 45205.1 Da    PI: 6.8358
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G173600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.84.3e-32241294255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Manes.14G173600.1.p 241 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 294
                          9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.05E-15238294IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-28239294IPR009057Homeodomain-like
TIGRFAMsTIGR015579.5E-24241294IPR006447Myb domain, plants
PfamPF002495.9E-7242293IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MSHKEGIIDY QSLNQIPDLS LHISLPNSAP SSICTATNDA DDSTFDVWRK HGALKSHSDS  60
SIKVGSEPDD DNIELSLAAN PAATTALEVE SPWRSRICYA GGDGGWSEAD RARQRNILLQ  120
RANSTGSSMS QINHGISSFQ PINGIPVYNS WKINSGEMDP RFCFNQIPYS SFCTPYPSPS  180
LGDTGSSFPA YRMGSSSVRP QYQNQYQYGG GGVGGAELYG SGMIRSRFIP KLQNKRNVRA  240
PRMRWTSSLH ARFVHAVELL GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKGTDK  300
PAASSDGSAD EDFLPVTTPI NHRAASTVSL EHDNGYTTCS IPWSNSSRER WVDSSSRDVK  360
GLREPERLSS QLEESELAES TSFKSVCNQL VETPSLEFSL GRPDCRSKLN H*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-17242296357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-17242296357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-17242296357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-17242296357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-17242296458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G173600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021634474.10.0transcription repressor KAN1-like isoform X1
TrEMBLA0A2C9UNI30.0A0A2C9UNI3_MANES; Uncharacterized protein
STRINGcassava4.1_010322m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17563391
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.11e-58G2-like family protein