PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.13G143500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 216aa    MW: 23535.4 Da    PI: 9.852
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.13G143500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.3e-202776255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a+++a+++++g
  Manes.13G143500.1.p 27 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDKAAREFRG 76
                         69*******.**********8...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.33E-332784No hitNo description
Gene3DG3DSA:3.30.730.102.7E-332784IPR001471AP2/ERF domain
PfamPF008473.8E-142776IPR001471AP2/ERF domain
PROSITE profilePS5103224.1572784IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-232785IPR016177DNA-binding domain
SMARTSM003803.4E-392790IPR001471AP2/ERF domain
PRINTSPR003671.3E-112839IPR001471AP2/ERF domain
PRINTSPR003671.3E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MAPKEKNNAT AGLKKGSSIN KDKKEMHYRG VRKRPWGRYA AEIRDPGKKS RVWLGTFDTA  60
EEAARAYDKA AREFRGSKAK TNFPLPDEII PINITKVVNH VNNQSPSQSS TVESSSPPAV  120
VREVTSKLGA VSGVVGRFPF VYQQQNVVGP VWFFDGSTVR PEFVTQQFPA VRFDPVGVEL  180
NGGLSGSQSD SDSSSVVDCK PTRDIDLNLP PLEDA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-242785261ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00542DAPTransfer from AT5G44210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.13G143500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021631932.11e-157ethylene-responsive transcription factor 9-like
TrEMBLA0A2C9URZ41e-156A0A2C9URZ4_MANES; Uncharacterized protein
STRINGcassava4.1_032424m1e-157(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-36erf domain protein 9