PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.13G109400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 190aa MW: 22100.8 Da PI: 9.8354 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.6 | 2.1e-11 | 88 | 147 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++ rr+++NRe+ArrsR RK+ +e+L+ v +L+ eN++L ++l ++ +++ e+ Manes.13G109400.1.p 88 DRKRRRMISNRESARRSRMRKQRHLENLRYQVNKLKIENRELTNRLRLVLYHCNTVRREN 147 7899***************************************99988877777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.9E-11 | 81 | 137 | No hit | No description |
SMART | SM00338 | 2.7E-13 | 85 | 149 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.795 | 87 | 150 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.61E-10 | 89 | 137 | No hit | No description |
Pfam | PF00170 | 1.3E-8 | 89 | 147 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.54E-18 | 90 | 141 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 92 | 107 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MMSAIPATLF PSADSVLGNQ FPSFENSFTP PWDCSDLFTF PDYQSPKAVV SSSGSDDPNE 60 PNKSNQNHAN SNCSSDDPNP ITVSMIDDRK RRRMISNRES ARRSRMRKQR HLENLRYQVN 120 KLKIENRELT NRLRLVLYHC NTVRRENEQL RYEHSMLRQK LSNIRQFLML KQLQQFTSAW 180 PCNNTTTTE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 92 | RKRRR |
2 | 101 | 108 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.13G109400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021632302.1 | 1e-139 | basic leucine zipper 4-like | ||||
TrEMBL | A0A2C9UQZ0 | 1e-138 | A0A2C9UQZ0_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_017015m | 1e-138 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 5e-39 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
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Phytozome | Manes.13G109400.1.p |