PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.13G062400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family SAP
Protein Properties Length: 472aa    MW: 52217.5 Da    PI: 7.452
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.13G062400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP8053.8e-24514711455
                  SAP   1 mssssssssseseegseggeggdass...........gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqv 79 
                          ms+ssss++  +++gs +g+g+++++           ge+egp+++r+r++nevwpePfleala+qvaidasr++Grlaaa+alanvfqv
  Manes.13G062400.1.p   1 MSTSSSSDNGGNGNGSGRGNGSGRGNgsgrgngsgvrGEYEGPPRTRPRTINEVWPEPFLEALAAQVAIDASRIFGRLAAAQALANVFQV 90 
                          9**************99999999888899************************************************************* PP

                  SAP  80 cstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfad 169
                          cstwravsrsdllw+rl++riW rt+ll+dtW++eyiyrhrtarnfrt+++s+++l+fdpadvd++nd+dal+Crclalsdkyla+Gfa+
  Manes.13G062400.1.p  91 CSTWRAVSRSDLLWRRLSSRIWGRTHLLHDTWHDEYIYRHRTARNFRTGTSSHFNLHFDPADVDDPNDPDALMCRCLALSDKYLACGFAN 180
                          ****************************************************************************************** PP

                  SAP 170 GavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvG 259
                          Gavrlfdl+trlh++tflpqhrdrlGrfsravsGi+i+d++lvfatldGdihva+i++  +aa+rr+++Gdvv+dGalv+f+G+g+WwvG
  Manes.13G062400.1.p 181 GAVRLFDLDTRLHARTFLPQHRDRLGRFSRAVSGIIINDAQLVFATLDGDIHVAIITS--NAAPRRVHFGDVVTDGALVHFTGRGQWWVG 268
                          *********************************************************9..88**************************** PP

                  SAP 260 lyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivss 349
                          l+aGvpGrafhiWd++te+l++vGG ltdP++v+GWh+lteltelvGrvrvt++etavaCts+rlvvf+lrn++++l++ee rrGliv++
  Manes.13G062400.1.p 269 LHAGVPGRAFHIWDGNTEQLTYVGGLLTDPDSVRGWHTLTELTELVGRVRVTNHETAVACTSMRLVVFNLRNPEIILQQEEPRRGLIVGC 358
                          ****************************************************************************************** PP

                  SAP 350 ldasneayvvvdsrGvatvrrvenleevcrfrvrgaqrgvlgCvnggyalvyaggvlrvWeiekkeg........ylyslrervgevnal 431
                          +d +n+ayv+vd+rG ++vrrv++++e+crf+vr  +rg +gC+nggyal++aggv+rvWeie++eg        yly+lrervgevnal
  Manes.13G062400.1.p 359 FDLWNDAYVAVDNRGLGIVRRVSTFQEMCRFNVR-PHRGAIGCINGGYALICAGGVTRVWEIEQREGeelgelreYLYNLRERVGEVNAL 447
                          **********************************.89***************************999999******************** PP

                  SAP 432 vaddrhvavsssdgtihlldfgaq 455
                          vaddrhva+ss++g+ih++dfgaq
  Manes.13G062400.1.p 448 VADDRHVAASSREGSIHVWDFGAQ 471
                          **********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.503.0E-1072149No hitNo description
PfamPF129374.5E-673108IPR001810F-box domain
SuperFamilySSF813837.68E-1073134IPR001810F-box domain
SuperFamilySSF509789.15E-14164257IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.106.6E-12165468IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509789.15E-14297467IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MSTSSSSDNG GNGNGSGRGN GSGRGNGSGR GNGSGVRGEY EGPPRTRPRT INEVWPEPFL  60
EALAAQVAID ASRIFGRLAA AQALANVFQV CSTWRAVSRS DLLWRRLSSR IWGRTHLLHD  120
TWHDEYIYRH RTARNFRTGT SSHFNLHFDP ADVDDPNDPD ALMCRCLALS DKYLACGFAN  180
GAVRLFDLDT RLHARTFLPQ HRDRLGRFSR AVSGIIINDA QLVFATLDGD IHVAIITSNA  240
APRRVHFGDV VTDGALVHFT GRGQWWVGLH AGVPGRAFHI WDGNTEQLTY VGGLLTDPDS  300
VRGWHTLTEL TELVGRVRVT NHETAVACTS MRLVVFNLRN PEIILQQEEP RRGLIVGCFD  360
LWNDAYVAVD NRGLGIVRRV STFQEMCRFN VRPHRGAIGC INGGYALICA GGVTRVWEIE  420
QREGEELGEL REYLYNLRER VGEVNALVAD DRHVAASSRE GSIHVWDFGA Q*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.13G062400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021632544.10.0transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH11e-179SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A2C9UPH70.0A0A2C9UPH7_MANES; Uncharacterized protein
STRINGcassava4.1_024963m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-153SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]