PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.13G049600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 236aa    MW: 26376.6 Da    PI: 10.3611
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.13G049600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.55.3e-11107150151
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                          +  +GV+++    +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Manes.13G049600.1.p 107 CVMRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 150
                          5689***966..5********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.53184163IPR001471AP2/ERF domain
PfamPF008473.6E-5107151IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-8108153IPR016177DNA-binding domain
SMARTSM003802.3E-4110165IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-6111155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MVSLRRRKLL GLCAGRSSFL SPLPPIFNNG TAPLSSTQNS RSVSVHPLPS DDVKLPGEKI  60
VSRFGAGSSN LSASSSSKEQ QSQPYPGQPV KRRKRHRRKH VQNQEPCVMR GVYFKNLKWQ  120
AAIKVDKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL SEEEKQELRK YKWDEFLAIT  180
RSAINNKKHK RHNGAGLQKR SEPESELQNV GEWDDKQGVN SFSASEDGEP DSSTS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.13G049600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021633239.11e-175ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_021633240.11e-175ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_021633242.11e-175ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_021633243.11e-175ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A251JGM91e-173A0A251JGM9_MANES; Uncharacterized protein
STRINGcassava4.1_015207m1e-174(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-46ERF family protein