PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.12G064800.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

SAP

Protein Properties

Length: 463aa MW: 51264.4 Da PI: 6.7661

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.12G064800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	815.1	3.3e-248	1	460	1	454
SAP 1 msss.sssssseseegseggeggdass.gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsr 88 msss ssssss ++ g+++gegg+ ++ g++egps++r+ra+nevwpePflealatqvaida+r++Grlaaa+alanvf+vcstwravsr Manes.12G064800.1.p 1 MSSSsSSSSSSGNGGGDNYGEGGGGGGgGDYEGPSRTRPRAINEVWPEPFLEALATQVAIDAARMFGRLAAAQALANVFRVCSTWRAVSR 90 55550556677788888888876654449*********************************************************** PP SAP 89 sdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdle 178 sdllw+rltrriW+rt+ll+dtWreey+yrhr+a nfr+rr+ ++tl+fdpadvd++nd+da++Crclalsd+yla+GfadGavrlfdl+ Manes.12G064800.1.p 91 SDLLWHRLTRRIWDRTHLLHDTWREEYVYRHRMAGNFRNRRSFHFTLHFDPADVDDPNDPDAHTCRCLALSDHYLACGFADGAVRLFDLH 180 ************************************************************************************** PP SAP 179 trlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGra 268 trlh +tf+pqhrdrlGrfsravsGi+i+ ++l+fa+ldGdihva+i++ +aa+rr+++Gdvv+dGalvdf+G+g+WwvGl+aGvpGra Manes.12G064800.1.p 181 TRLHSHTFRPQHRDRLGRFSRAVSGIIINGMQLIFASLDGDIHVAIINS--HAAPRRVHFGDVVTDGALVDFTGRGQWWVGLHAGVPGRA 268 *********************************************..88********************************* PP SAP 269 fhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayv 358 fhiWd++te+l+fvGG ltdP++v+GWh+lteltelvGrvrvt++etavaCtslrl+ fdlrnqgv+l++ee rrG+ivs++d++n+a++ Manes.12G064800.1.p 269 FHIWDGNTEQLTFVGGGLTDPDSVRGWHTLTELTELVGRVRVTDHETAVACTSLRLMEFDLRNQGVILHQEEPRRGIIVSCFDVWNDAVL 358 ************************************************************************************** PP SAP 359 vvdsrGvatvrrvenleevcrfrvrgaqrgvlgCvnggyalvyaggvlrvWeiekkeg.......ylyslrervgevnalvaddrhvavs 441 vvd+rGv++vrrv++leevcrf+vr +qrg++gC+nggyal++aggv+rvWeie+++g ylyslre+ gevnalvad+rhva+s Manes.12G064800.1.p 359 VVDNRGVGIVRRVSTLEEVCRFNVR-SQRGLIGCINGGYALICAGGVIRVWEIEQHGGevrelreYLYSLREGRGEVNALVADERHVAAS 447 *********************.89***********************9999999************************ PP SAP 442 ssdgtihlldfga 454 sdg+ih++dfga Manes.12G064800.1.p 448 GSDGSIHVWDFGA 460 **********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.1280.50	5.5E-9	64	161	No hit	No description
SuperFamily	SSF81383	7.19E-9	71	123	IPR001810	F-box domain
SMART	SM00320	11	128	178	IPR001680	WD40 repeat
SuperFamily	SSF50998	2.28E-16	143	459	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily
Gene3D	G3DSA:2.130.10.10	5.4E-14	162	458	IPR015943	WD40/YVTN repeat-like-containing domain
SMART	SM00320	0.45	420	457	IPR001680	WD40 repeat
PROSITE pattern	PS00678	0	444	458	IPR019775	WD40 repeat, conserved site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence Send to blast
MSSSSSSSSS SGNGGGDNYG EGGGGGGGGD YEGPSRTRPR AINEVWPEPF LEALATQVAI 60 DAARMFGRLA AAQALANVFR VCSTWRAVSR SDLLWHRLTR RIWDRTHLLH DTWREEYVYR 120 HRMAGNFRNR RSFHFTLHFD PADVDDPNDP DAHTCRCLAL SDHYLACGFA DGAVRLFDLH 180 TRLHSHTFRP QHRDRLGRFS RAVSGIIING MQLIFASLDG DIHVAIINSH AAPRRVHFGD 240 VVTDGALVDF TGRGQWWVGL HAGVPGRAFH IWDGNTEQLT FVGGGLTDPD SVRGWHTLTE 300 LTELVGRVRV TDHETAVACT SLRLMEFDLR NQGVILHQEE PRRGIIVSCF DVWNDAVLVV 360 DNRGVGIVRR VSTLEEVCRF NVRSQRGLIG CINGGYALIC AGGVIRVWEI EQHGGEVREL 420 REYLYSLREG RGEVNALVAD ERHVAASGSD GSIHVWDFGA EL*

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence Send to blast

MSSSSSSSSS SGNGGGDNYG EGGGGGGGGD YEGPSRTRPR AINEVWPEPF LEALATQVAI  60
DAARMFGRLA AAQALANVFR VCSTWRAVSR SDLLWHRLTR RIWDRTHLLH DTWREEYVYR  120
HRMAGNFRNR RSFHFTLHFD PADVDDPNDP DAHTCRCLAL SDHYLACGFA DGAVRLFDLH  180
TRLHSHTFRP QHRDRLGRFS RAVSGIIING MQLIFASLDG DIHVAIINSH AAPRRVHFGD  240
VVTDGALVDF TGRGQWWVGL HAGVPGRAFH IWDGNTEQLT FVGGGLTDPD SVRGWHTLTE  300
LTELVGRVRV TDHETAVACT SLRLMEFDLR NQGVILHQEE PRRGIIVSCF DVWNDAVLVV  360
DNRGVGIVRR VSTLEEVCRF NVRSQRGLIG CINGGYALIC AGGVIRVWEI EQHGGEVREL  420
REYLYSLREG RGEVNALVAD ERHVAASGSD GSIHVWDFGA EL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	130	RMAGNFRNRR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.12G064800.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021630186.1	0.0	transcriptional regulator STERILE APETALA
Swissprot	Q9FKH1	1e-180	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A2C9UTW6	0.0	A0A2C9UTW6_MANES; Uncharacterized protein
STRING	cassava4.1_023862m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7687	31	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	1e-168	SAP family protein

Link Out ? help Back to Top
Phytozome	Manes.12G064800.1.p

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]