PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.09G046100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | Dof | ||||||||
Protein Properties | Length: 305aa MW: 33265.4 Da PI: 6.2579 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 119 | 1.7e-37 | 14 | 69 | 7 | 62 |
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++++ Manes.09G046100.1.p 14 SCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRVK 69 7****************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-27 | 1 | 67 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.714 | 13 | 67 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.8E-31 | 14 | 67 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 15 | 51 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MDRGWKANVE IPPSCPRCGS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG GSLRNVPVGG 60 GCRKNRRVKS LRLSTSDVAH SRSFGAFSSK GVTSVESRSS SMTSDGSHID LALVYANFMN 120 PHQPPPSKST ATTTTTATSS TGFEMQELGT GEFDQPLDFP TIPNSNLESS SVQLHGSLDG 180 CLTTISGSYM EAPSDDNNNH QLMCYYGADS STHNHQAHDN NVQQCLGTHH ESNHNGLPPL 240 PGEEVSSHEE ILWSNSHLMC NDHTMQVTQD PVVGPETQDS NLLFGSWNPF DLSSVNISSQ 300 GLDN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.09G046100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021623515.1 | 0.0 | dof zinc finger protein DOF3.5-like | ||||
TrEMBL | A0A2C9V952 | 0.0 | A0A2C9V952_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_032883m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1817 | 33 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 6e-53 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.09G046100.1.p |