PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G023500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 294aa    MW: 32420.9 Da    PI: 8.3327
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G023500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00054227249223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                          +Cp Cg +Fs+ + L+ H ++ H
  Manes.09G023500.1.p 227 ECPQCGARFSSVMVLVEHVQKvH 249
                          5*****************99988 PP
2zf-C2H216.91.8e-05265287223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                          +Cp+C+k F+++  L+ H  + H
  Manes.09G023500.1.p 265 VCPKCSKGFRDPVALVEHVERdH 287
                          7*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183104.19E-13650No hitNo description
PROSITE profilePS510398.0911056IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.2E-101153IPR000058Zinc finger, AN1-type
PfamPF014281.9E-131351IPR000058Zinc finger, AN1-type
SMARTSM001540.00171352IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.109.1E-1190149IPR000058Zinc finger, AN1-type
SuperFamilySSF1183103.14E-993144No hitNo description
PROSITE profilePS510397.98898146IPR000058Zinc finger, AN1-type
PfamPF014285.5E-8101141IPR000058Zinc finger, AN1-type
SMARTSM001540.03101142IPR000058Zinc finger, AN1-type
SMARTSM003550.018226249IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.078226254IPR007087Zinc finger, C2H2
SuperFamilySSF576679.26E-5227283No hitNo description
PROSITE patternPS000280228249IPR007087Zinc finger, C2H2
PROSITE profilePS501578.85264292IPR007087Zinc finger, C2H2
SMARTSM003555.4264287IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280266287IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MGTPQFPDLG KHCTREDCKQ IDFLPFTCDR CLQVFCLEHR SYAKHGCPKA DRQDVTVVIC  60
PLCAKGVRLN PDEDPNISWE THVNTECDPS NYEKVTKKRK CPVRGCREVL TFSNTIKCRD  120
CTIDHCLKHR FGPDHDCPGP KKLEAGFQFL SLLNRSRKEE SKPNKTPAAS STKWASAFRN  180
AASTVRASAE AGVAKLSTEI SQAWQTAKSP AGPSSSNGRD AIGLEEECPQ CGARFSSVMV  240
LVEHVQKVHE RSANQSRVLK LPVDVCPKCS KGFRDPVALV EHVERDHGGT SKA*
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G023500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021622101.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
SwissprotQ8VZ421e-128SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A2C9V9C90.0A0A2C9V9C9_MANES; Uncharacterized protein
STRINGcassava4.1_013007m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-130C2H2 family protein