PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G009700.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family MYB_related
Protein Properties Length: 796aa    MW: 88240.8 Da    PI: 6.8224
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G009700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.1e-095193347
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +WT eE+e +  a +q G++ +++I r+++  +   q++++++ +
  Manes.08G009700.1.p 51 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 93
                         6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.4E-114298IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-64596IPR009057Homeodomain-like
PROSITE profilePS5129313.2644798IPR017884SANT domain
SMARTSM007176.5E-74896IPR001005SANT/Myb domain
PfamPF002491.4E-65193IPR001005SANT/Myb domain
CDDcd001677.46E-75194No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 796 aa     Download sequence    Send to blast
MELESQVSLD TNVHSHTENT SIQHGDTGTS SIPDHDKLQQ PVKKPTRQWA AWTREEEESF  60
FTALRQVGKN FEKITRRVQS KNKDQVRHYY YRLVRRMNKL LGPGLCLDAK NSKDTNAAML  120
RWWSLLEKYS CKASKLHLKP RRFKIFIEAL ETQLLKDRKK NVRKRPSQVE NGSPTVPSTI  180
TSQNRASAHE TRTVKLVLVD SQNLQRLGAG KGSLKRNVNI GVIRSNRGDS TAMKPARQRR  240
KPGIVLSAAY KKWEKAAIAG VSLVADAAEH LERTATDKEG ENDHHVPEHK SPDAIEKGLP  300
SLPSFSQNHY VEVNAQTNIK LKLQLFPIDD DTRRALEMDK HNPYLELTLS TRKKISSVLE  360
HLYRKWGNSS IASGELMLFP YTAHRENLVS YQRWTRDSIV SASDVYASIG SPPVFRLRYG  420
WFSNIELANA MLQAPSASNF IPGGNSVDME SEKRKIVDSV STSGLSTNDR SEKNMDFYKD  480
QLSAGNKSHA SAPPTTDVLN DYIAEGPRNN FVGSSVPAAK VSWHENEIGN KTNMRQLHDA  540
GDQKLCNGIA SSAGEWADSL TNISVGDLLS EVPHNVDPNC IEALTAQSSH CLQEMPFSCD  600
SFDAAIAAHM SRHQSKMVFP STVTSNTSSI WDAEETCDAF SFQKNHAPHL EIPTSIDVVP  660
QGADKQTNSM VSGAFVEGLP SGEGPVDYPA ETDPMDDCST DPLVVDNLAK DFTGLTDIYW  720
PESLGPLDLD IPSSRYHSEE FLLSDSLSGL NRLIASSLDA FQSCSFFGLD KKDSIPVVEA  780
RESSSFSDFK IGSGV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G009700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621181.10.0TSL-kinase interacting protein 1-like isoform X2
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A251K9520.0A0A251K952_MANES; Uncharacterized protein
STRINGcassava4.1_002262m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98832531
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.30.0TSL-kinase interacting protein 1