PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G181100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 326aa    MW: 36088 Da    PI: 4.5121
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G181100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-102512911055
                          HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Manes.05G181100.1.p 251 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 291
                          9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.926241290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-14241307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.8E-12246300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-11247296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.07E-11250295No hitNo description
PfamPF000101.2E-7251291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
METLGAFPDG EWDFSRMFST QDQLDITSEL LGQCSFPVGN EEGVQFANPT AFFSNPEANL  60
NMADENSSSS NCSSSVLIPS FRQETYLFSD SNSILTTNDD SMSMDFCIMD EKNSGSFVAM  120
FPEIAMTETE TVCINEPGAN SVPARELQLK RMLDFPESEA NPSGNKRSRV TRDVQKSKKK  180
VTSRKNQKFI PGNNEENGQS SSSCSSEEDN ASQDSNRGAS SDSKVSETLN SNGKTRASRG  240
SATDPQSLYA RKRRERINER LRILQNLVPN GTKVDISTML EEAVHYVKFL QLQIKLLSSD  300
DLWMYAPIAY NGMDIGLNQK ISMLL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G181100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611768.10.0transcription factor bHLH84-like
TrEMBLA0A2C9VXC80.0A0A2C9VXC8_MANES; Uncharacterized protein
STRINGcassava4.1_025628m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-45bHLH family protein