PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G091800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 319aa    MW: 36564.9 Da    PI: 5.0144
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G091800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.44.2e-2151313128
                  NAM   3 pGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykv.ePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratk..sgyWkatg 87 
                          pG+rF Ptdeelv +yL ++++g+ +     vi+e+d+y++ ePw+L +++k + + +++fF+k +kk++ ++r nr++    g+W+  g
  Manes.05G091800.1.p   5 PGLRFCPTDEELVGHYLLRRITGELTAWqYGVIRECDLYSTeEPWELWQRYKLNVSeDVFFFTKLNKKNTGSSRINRKIGagGGTWH--G 92 
                          9*********************9995551367********978****866655555378**********99******7653378898..7 PP

                  NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          ++ +v++  + l+  kk + + + ++ + +   W + ey++
  Manes.05G091800.1.p  93 ESGSVIH-VSGLTAYKKRFSYRNPSKLD-QDRCWNLIEYSM 131
                          7778888.67799*******98555555.6778***99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.7363150IPR003441NAC domain
SuperFamilySSF1019414.97E-244149IPR003441NAC domain
PfamPF023652.3E-145130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MEDFPGLRFC PTDEELVGHY LLRRITGELT AWQYGVIREC DLYSTEEPWE LWQRYKLNVS  60
EDVFFFTKLN KKNTGSSRIN RKIGAGGGTW HGESGSVIHV SGLTAYKKRF SYRNPSKLDQ  120
DRCWNLIEYS MDLEVSNTSD YHVLCQLKMS NRNRFNSKKR KYGLHDEATH GFLPNKRSEI  180
ESNKFQESQP VPILQRVMEF GAQKLLMTSF DPAAVHQPSN DVQENLSVVI SPSTIEVESS  240
SSLMGIEDDP AFDLHSVTNN TSLEQLVQPL SYVGTTVSPI NMEDTSPKQL QDACYDESLW  300
LEHFTSKMKD DLPEINQDQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G091800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021612874.11e-157NAC domain-containing protein 105-like
TrEMBLA0A2C9VUQ00.0A0A2C9VUQ0_MANES; Uncharacterized protein (Fragment)
STRINGcassava4.1_025821m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66300.12e-15NAC domain containing protein 105