PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G021900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 160aa    MW: 17721.8 Da    PI: 8.3341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G021900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.32.2e-143478155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + y+GVr ++ +g+Wv+          + r++lg+f  +e+Aaka++ a+ +l+g
  Manes.05G021900.1.p 34 PVYHGVRKRR-WGKWVSK---------KSRIWLGSFSVPEMAAKAYDVAAYCLKG 78
                         68*****887.*****88.........5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.8E-83478IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-213587IPR001471AP2/ERF domain
SMARTSM003805.6E-233592IPR001471AP2/ERF domain
PROSITE profilePS5103217.2013586IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-163587IPR016177DNA-binding domain
PRINTSPR003671.8E-113647IPR001471AP2/ERF domain
CDDcd000186.01E-223687No hitNo description
PRINTSPR003671.8E-116888IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MEHPPYTEHD MTTTFPRASI NQTSNASRRS TRHPVYHGVR KRRWGKWVSK KSRIWLGSFS  60
VPEMAAKAYD VAAYCLKGCK AQLNFPNEVD DLPRPSSSKG SDIQAAAAMA AHSMITEEKS  120
SCSATNSGGD SDDFWGEIDL PELMNCGFNW SPRAWTTFA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1233901276Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G021900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021614455.11e-110ethylene-responsive transcription factor ERF023
SwissprotQ1ECI22e-47ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A2C9VSJ51e-116A0A2C9VSJ5_MANES; Uncharacterized protein
STRINGcassava4.1_026916m1e-108(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF63752847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.16e-49ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]