PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000932292
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 177aa    MW: 18883.8 Da    PI: 5.2417
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000932292genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.2e-151867255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   + kGVr++k +g+Wv+eIr+p   g +  r +lg+f tae Aa a++ a  +l+ 
  MDP0000932292 18 KLKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSTAEAAAVARDVAYYCLRR 67
                   679*****9.**********8...3.35***********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.09E-161878IPR016177DNA-binding domain
CDDcd000184.31E-231877No hitNo description
PfamPF008472.9E-71861IPR001471AP2/ERF domain
SMARTSM003802.7E-231883IPR001471AP2/ERF domain
PROSITE profilePS5103220.021877IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-231977IPR001471AP2/ERF domain
PRINTSPR003674.7E-81930IPR001471AP2/ERF domain
PRINTSPR003674.7E-84157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MSYSSEESGS PCSTTNRKLK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFST AEAAAVARDV  60
AYYCLRRPST LEGLNFPLEL PPCARDDMSP RSVQKAASDA GMAVDAQLIA NKSPPQQPAG  120
TGSYAVETTE FWEDGYVGQS STSTSRGSWG GGHGFGNGGD HQGGLSISID DYDLQI*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008339079.11e-128ethylene-responsive transcription factor ERF019
SwissprotO805424e-43ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A498JGG85e-94A0A498JGG8_MALDO; Uncharacterized protein
STRINGXP_008339079.11e-127(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.16e-38ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]