PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000921016
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 413aa    MW: 46153 Da    PI: 4.406
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000921016genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM509.8e-1681512128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk.s 80 
                    ppGfrF+Ptd+el+  +L+  + +++      + ++++++++++  +++P+++ +        +++a ++  +yfFs+ ++ +++g++  r++   
  MDP0000921016   8 PPGFRFKPTDQELIGTFLHYFLVTTPrllppPPHNTFMQKCNLFgnRSQPSQIWEafgggaalQLAAADQpALYFFSELKRITPKGSKLDRKMGlG 103
                    9*******************99999889887555567****98522689****74478888774444444488******************66559 PP

            NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    g+W+ +     v  +  +++ +glk+t+ + +  + +  +  W ++ey+l
  MDP0000921016 104 GTWEGKSVPAWVEGTegNSTCIGLKRTFWYKN--EGTEDHGGWKLDEYSL 151
                    9***88888888776556666*******9973..3333589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.19E-185175IPR003441NAC domain
PROSITE profilePS5100522.6037176IPR003441NAC domain
PfamPF023651.5E-128151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MENHSLFPPG FRFKPTDQEL IGTFLHYFLV TTPRLLPPPP HNTFMQKCNL FGNRSQPSQI  60
WEAFGGGAAL QLAAADQPAL YFFSELKRIT PKGSKLDRKM GLGGTWEGKS VPAWVEGTEG  120
NSTCIGLKRT FWYKNEGTED HGGWKLDEYS LFASPRKRNS HTGYDFDFVL CRLRNTSGIN  180
KRKCSTSSSQ DDEVPKMKKK RANEEIEQNM HAINVEEEGR RGNSCLTSNS VVSDQENNEF  240
PVXDYVDYVD YGYDDNDQRL TITIAELNKI LAKEPTDGAV EVLFPTASAS EELLLGKERQ  300
EVPLSVSSTV VVAHGEVEDE ALNPNMLEES IPETRELPLP ALSGTAEDGT VEEKAWDPSL  360
LEQYWLAETQ EEEPLNPSFY RDFMFADGGG VEEAYHPSAF DNVVDQSLFG SC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180200KRKCSTSSSQDDEVPKMKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956331.10.0NAC domain-containing protein 102-like
TrEMBLA0A498KEC10.0A0A498KEC1_MALDO; Uncharacterized protein
STRINGXP_009358388.11e-107(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15308210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.19e-08NAC domain containing protein 67