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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
MDP0000884524 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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| Family |
GRAS |
| Protein Properties |
Length: 514aa MW: 56341.8 Da PI: 5.4018 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000884524 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 337.6 | 2.2e-103 | 126 | 504 | 1 | 374 |
GRAS 1 lvelLlecAeavss..gdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPi 90
lv+lL+++Aea++ ++ la+ +L rl+el+sp++ ++m+Rlaay+teAL+ l +++ l k l s +++++ +++ a++l++++sP+
MDP0000884524 126 LVHLLIAAAEALTGayKSRDLARVILVRLKELVSPTDgSNMERLAAYYTEALQGLLEGTGGLLGKHLIGSGAHRNHghhPMDVTVAFQLLQDMSPY 221
68**********98556677************9987769*******************99999999987777777767788999999********* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
+kf+h+taNqaIleav +e+r+H++D+di++G+QW++L+qaL sR+egpp lRiT++++ s s +++etg+rL++fA+++g pf+f+
MDP0000884524 222 VKFGHFTANQAILEAVVHERRIHVVDYDIMEGIQWASLMQALVSRKEGPPtpLLRITALSRGGSRrqSIGTVQETGRRLTEFAASIGQPFSFHQCR 317
**********************************************8876559*******97766778999***********************87 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpr 277
+ e++++++L++ +gE+l++n++l+l ++ +s ++ ++L+ k+lsP++v++ve+++ ++ F++rf+++l++ysa++dslea++p
MDP0000884524 318 LGSDETFQPSALKLIKGETLVINCMLNLPHFSYRSPDSIA---SFLSGAKTLSPRLVTLVEEDVRStWDGGFVARFMDSLYHYSAVYDSLEAGFPM 410
7899***************************966665555...9*******************9997899************************** PP
GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSa 372
+s++r+ vEr++lg++iv +a+ ++ e ++Wrerl+++GFkp+p+s + +qaklll ++ dgyrvee ++ lvlgWk+r L+s+S
MDP0000884524 411 QSRARALVERVFLGPRIVGSLAHIYRA---HGEVGHSWRERLGAVGFKPIPISFANHCQAKLLLGLFN-DGYRVEEVtNHRLVLGWKSRCLLSASI 502
*************************99...778889********************************.******76488899************* PP
GRAS 373 Wr 374
W+
MDP0000884524 503 WT 504
*6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 514 aa
Download sequence Send
to blast |
MTQLLLNSVM AMAIDGHDDP DLDLSGCSPT TTSTNTVSTD HWYAWSPLVD WEALAPIDQL 60
AGDDFHGLIE SMVEDQDGST ELNSSSAQDE PLELEASNDT TTLGEMMTLT DEDGCANGED 120
LKGLRLVHLL IAAAEALTGA YKSRDLARVI LVRLKELVSP TDGSNMERLA AYYTEALQGL 180
LEGTGGLLGK HLIGSGAHRN HGHHPMDVTV AFQLLQDMSP YVKFGHFTAN QAILEAVVHE 240
RRIHVVDYDI MEGIQWASLM QALVSRKEGP PTPLLRITAL SRGGSRRQSI GTVQETGRRL 300
TEFAASIGQP FSFHQCRLGS DETFQPSALK LIKGETLVIN CMLNLPHFSY RSPDSIASFL 360
SGAKTLSPRL VTLVEEDVRS TWDGGFVARF MDSLYHYSAV YDSLEAGFPM QSRARALVER 420
VFLGPRIVGS LAHIYRAHGE VGHSWRERLG AVGFKPIPIS FANHCQAKLL LGLFNDGYRV 480
EEVTNHRLVL GWKSRCLLSA SIWTSPLESD VVN*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots and leaves. {ECO:0000269|PubMed:15961668}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
