PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000868556

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

NAC

Protein Properties

Length: 295aa MW: 33860.7 Da PI: 6.8837

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000868556	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.9	3e-47	19	145	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 pGfrFhPt+eel+ +yLk v gk+l++ ++i ++iy+++PwdLp k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s MDP0000868556 19 PGFRFHPTEEELLEFYLKSMVFGKRLRF-DIIGFLNIYHHDPWDLPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKIVSLsnP 113 9***********************99.99***********8778899*********************************997556 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +gl+ktLvfykgrap+g+ktdWvm+eyrl MDP0000868556 114 KRIIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 145 777*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.97E-57	17	163	IPR003441	NAC domain
PROSITE profile	PS51005	54.669	17	163	IPR003441	NAC domain
Pfam	PF02365	4.5E-25	19	145	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MAANTIEPDH QMTPEFELPG FRFHPTEEEL LEFYLKSMVF GKRLRFDIIG FLNIYHHDPW 60 DLPGLSKIGE REWYFFVPRD RKHGSGGRPN RTTETGFWKA TGSDRKIVSL SNPKRIIGLR 120 KTLVFYKGRA PRGSKTDWVM NEYRLPDNCQ YLKDIVLCKI YRKATSLKVL EQMAAIEGDQ 180 IKNLHASPNS SPPPTSMDTI SFCSQALQED LTPQISTNHV VFKQEIEDAA LVIAQEQKDE 240 NAMEIKGSPP PPMYNLPELQ VPKFSMDWTQ DTVWTQMNSP WLQNLTPLAN ILNF*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	7e-47	19	163	17	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008392474.1	0.0	NAC domain-containing protein 22-like
Swissprot	Q10S65	5e-95	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A498IZP0	0.0	A0A498IZP0_MALDO; Uncharacterized protein
STRING	XP_008392474.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6214	32	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-117	NAC domain containing protein 36

Link Out ? help Back to Top
Phytozome	MDP0000868556

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]