PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000729316

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

VOZ

Protein Properties

Length: 538aa MW: 59778.8 Da PI: 6.0739

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000729316	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	434.5	1.4e-133	261	477	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpaqg +w+ dycssfha+lalneg+pg+ pvlrp+gi+lkdgllfaalsak+qgk vgipecegaatakspwna+e+f MDP0000729316 261 PPPSAFLGPKCALWDCPRPAQGLDWWLDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKGVGIPECEGAATAKSPWNAPEFF 356 89******************************************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 dls+lege irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+aly lelklvd+ MDP0000729316 357 DLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYXLELKLVDG 452 ******************************************************************************************** PP VOZ 193 kksakgkvskdsladlqkklgrlta 217 kk++k+k+++ds+adlqk++grl+a MDP0000729316 453 KKNSKSKLTNDSVADLQKQMGRLSA 477 *********************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence Send to blast
MSLATDPSSH RQDIRATVSY PTMRPTPSLL PEVCRLEIGI KHFEGDYWKG AGVVMKGSKS 60 TCKSASHKLF KDKAKNRVDD LQGMFTDLQF ARKESRSIDA ALLEEQVHQM LREWKAELNE 120 PSSASSFQQQ GGSLGSFSSD ICRLLQLCEE EDDATSPLAA PKSEPNDQNL QVGESLVFHE 180 GFSVNQGQQE HAFPLADQCK SSPSGVRNAV NNLEGANQLD YHQFELHQDF EQSFYPCFHG 240 TALRGEDTLS QASTYLPSIF PPPSAFLGPK CALWDCPRPA QGLDWWLDYC SSFHAALALN 300 EGPPGMGPVL RPGGIGLKDG LLFAALSAKA QGKGVGIPEC EGAATAKSPW NAPEFFDLSV 360 LEGEIIREWL FFDKPRRAFE SGNRKQRSLP DYNGRGWHES RKQVMNEFGG LKRSYYMDPQ 420 PLNHFEWHLY EYEINKCDAC ALYXLELKLV DGKKNSKSKL TNDSVADLQK QMGRLSAEFP 480 SDNKRTVKGR AKVNAKVSVG NVYYAPNRGA TTNGTFDYEI GAPYDYLVDN VNGYYLT*

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence Send to blast

MSLATDPSSH RQDIRATVSY PTMRPTPSLL PEVCRLEIGI KHFEGDYWKG AGVVMKGSKS  60
TCKSASHKLF KDKAKNRVDD LQGMFTDLQF ARKESRSIDA ALLEEQVHQM LREWKAELNE  120
PSSASSFQQQ GGSLGSFSSD ICRLLQLCEE EDDATSPLAA PKSEPNDQNL QVGESLVFHE  180
GFSVNQGQQE HAFPLADQCK SSPSGVRNAV NNLEGANQLD YHQFELHQDF EQSFYPCFHG  240
TALRGEDTLS QASTYLPSIF PPPSAFLGPK CALWDCPRPA QGLDWWLDYC SSFHAALALN  300
EGPPGMGPVL RPGGIGLKDG LLFAALSAKA QGKGVGIPEC EGAATAKSPW NAPEFFDLSV  360
LEGEIIREWL FFDKPRRAFE SGNRKQRSLP DYNGRGWHES RKQVMNEFGG LKRSYYMDPQ  420
PLNHFEWHLY EYEINKCDAC ALYXLELKLV DGKKNSKSKL TNDSVADLQK QMGRLSAEFP  480
SDNKRTVKGR AKVNAKVSVG NVYYAPNRGA TTNGTFDYEI GAPYDYLVDN VNGYYLT*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.950	0.0	bud\| fruit\| leaf

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB531023	0.0	AB531023.1 Malus x domestica MdVOZ1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008371423.1	0.0	uncharacterized protein LOC103434841 isoform X1
Refseq	XP_008371424.1	0.0	uncharacterized protein LOC103434841 isoform X1
Refseq	XP_028957608.1	0.0	uncharacterized protein LOC103434841 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A498JVE7	0.0	A0A498JVE7_MALDO; Uncharacterized protein
STRING	XP_008371423.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	MDP0000729316

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]