PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000717044 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | SAP | ||||||||
Protein Properties | Length: 131aa MW: 13699.8 Da PI: 10.7117 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 89 | 6e-28 | 13 | 99 | 2 | 84 |
SAP 2 ssssssssseseegseggeggdass....gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwr 84 ssssss s++++g++g +g + s g+++gpsssr+ra+nevwpePf+eala+qva++asr +Grlaaa+alanvfq + r MDP0000717044 13 SSSSSSPTSHDGNGDDGANGAGPSHvqrgGDFQGPSSSRRRAVNEVWPEPFVEALASQVATEASRAVGRLAAAPALANVFQHETITR 99 334444444555555555555444388999**************************************************9876554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MSTSYSSAPS STSSSSSSPT SHDGNGDDGA NGAGPSHVQR GGDFQGPSSS RRRAVNEVWP 60 EPFVEALASQ VATEASRAVG RLAAAPALAN VFQHETITRE HVHDQVSKSK KKXKKIRKGK 120 EDPIRAGKRA * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028953353.1 | 1e-54 | transcriptional regulator STERILE APETALA-like | ||||
TrEMBL | A0A498H913 | 3e-53 | A0A498H913_MALDO; Uncharacterized protein | ||||
STRING | XP_009343485.1 | 8e-39 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7687 | 31 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 1e-08 | SAP family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000717044 |