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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
MDP0000669451 |
| Common Name | SPMdDELLA2b |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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| Family |
GRAS |
| Protein Properties |
Length: 585aa MW: 63722 Da PI: 4.6803 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000669451 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 455.8 | 2.7e-139 | 218 | 578 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
lv++L++cAeav++++l+la+al++++ la+++ +m+++a+yf+eALa+r++r +y p++ +++ s+ l + f+e++P+lkf+h+
MDP0000669451 218 LVHTLMACAEAVQQENLKLADALVKHVGLLAASQTGAMRKVATYFAEALARRIYR----IY----PQDCLDSSYSDILEM--HFYETCPYLKFAHF 303
689****************************************************....44....444443335555544..5************* PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +va++l+dl+++
MDP0000669451 304 TANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVASSLADLTPS 399
************************************************************************************************ PP
GRAS 193 eLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
+L+++p gE++aVn+v++lhrll++++++++ vL+ +k ++Pk+v++veqea+hn++ Fl+rf+eal+yys lfdsle + + +++ +++
MDP0000669451 400 MLDIRPseGEVVAVNSVFELHRLLARPGAVDK----VLSSIKAMKPKIVTIVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGS--SGPSQDLVMS 489
******99****************99999988....*********************************************999..566999**** PP
GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++lgr+i+nv aceg +r+erhetl++Wr r+++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++gsl+lgW++rpL+++SaW+
MDP0000669451 490 EVYLGRQICNVMACEGGDRVERHETLSQWRGRMDSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVEENNGSLMLGWHTRPLIATSAWQ 578
****************************************************************************************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009739 | Biological Process | response to gibberellin |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 585 aa
Download sequence Send
to blast |
MKRDHRDSRA TVTARQNNSK PEYSSPPSSA LNGKAKIWED DQDGYSAGGD MDELLAVLGY 60
KVRSDDMADV AEKLEQLEMV MGSAQEDGIS QLSDTVHYNP SDLSGWVQSM LSELNTGDDM 120
PSIDDPLLAP AESSSITSMS FSNSQRSRVF SDDSEYDLRA IPGVAAYPPA YSPSDSESTX 180
KRLKTSIGSD SNGSSSXAVS DPTRPRVLVD SQETGVRLVH TLMACAEAVQ QENLKLADAL 240
VKHVGLLAAS QTGAMRKVAT YFAEALARRI YRIYPQDCLD SSYSDILEMH FYETCPYLKF 300
AHFTANQAIL EAFATASRVH VIDFGLKQGM QWPALMQALA LRPGGPPAFR LTGIGPPQPD 360
NTDALQQVGW KLAQLAETIG VEFEFRGFVA SSLADLTPSM LDIRPSEGEV VAVNSVFELH 420
RLLARPGAVD KVLSSIKAMK PKIVTIVEQE ANHNGPVFLD RFTEALHYYS NLFDSLEGSS 480
GPSQDLVMSE VYLGRQICNV MACEGGDRVE RHETLSQWRG RMDSAGFDPV HLGSNAFKQA 540
SMLLALFAGG DGYRVEENNG SLMLGWHTRP LIATSAWQLA SATE*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ007884 | 0.0 | DQ007884.1 Malus x domestica DELLA protein (RGL2b) mRNA, complete cds. |
