PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000666991
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family GRAS
Protein Properties Length: 538aa    MW: 61148.5 Da    PI: 4.3893
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000666991genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1311.3e-401675342374
           GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                    ++ L ++ ea++ g+ +l + ++  l e ++p g++++Rla+y+  +     ++      + l+ ++      ++   a+++f++++P+ +f+h +
  MDP0000666991 167 RHMLKAFNEAMEMGQRKLEEVIMRFLAEKVNPLGQSLERLAFYLCLGFVDNQQG------DYLKQES-----FKNFEDAFNMFYQIFPFGRFAHYA 251
                    788999999************************************999988888......4444433.....4566678999************** PP

           GRAS  98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvak.r 185
                    aN aIleav ++ e+vH++ fdi++G+Q p L++a a+R++    l++T+++   ++       + + eet+++L++ A ++g++++ + +  +  
  MDP0000666991 252 ANTAILEAVPEDvETVHVVEFDIGEGVQLPQLIEAVAKRNKT---LKVTAIKWDVEEsdevapPQWRFEETKRQLQHHAXSFGLNLKVEEIXIEdL 344
                    *********9999**************************765...******976555668899999***********************9944414 PP

           GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPk....vvvvveqe..adh.nsesFlerflealeyysalfdsleak 274
                    ++ ++  + r   +E la n+++ l ++   +  ++    e+L+l k+l  +    ++++ + +  a + n++sF   f   + +y al+ sle++
  MDP0000666991 345 VSXIKKXNKRGGXREFLAFNSMVGLPHMR--RRRSRGLLMEFLRLAKDLLTNsargIITFGDGDayARRgNDSSFISFFDANVVHYEALLGSLESS 438
                    4445555545555**************97..4444445789*******966544569*****99655568************************** PP

           GRAS 275 lpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLv 368
                    +p++  e+r+++E +++++ +++    e+ +   +  +l+ W      +G++  ++s ++ ++ak ++   +s g rv  e+ ++++l W++ pL+
  MDP0000666991 439 FPSHLgEARMVMELMFVAPYVSSQAWFEKWNEAREAGNLHPW------FGLEGRRVSREMLMEAKEIVGADSSYGVRVGgENGNEMTLEWNSIPLI 528
                    **999899***********************88999999999......8*****************************967778888********* PP

           GRAS 369 svSaWr 374
                     v  W+
  MDP0000666991 529 RVETWT 534
                    **9995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098521.958140513IPR005202Transcription factor GRAS
PfamPF035144.6E-38167534IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MMQSEMNFQT FWPCLNETNS TLDTNEYTEQ MGSSEFSSIF MPSDEFSETS NSFPFSTMFS  60
GESEQLADCD HLLQATWMAE EEFTIELGGF ETNYLMGEIE NMYASCVEGS EGSNTLPSPQ  120
FSVEGNGVWS PNSFVTSEAS SMDVTSVQQS ITLARDEMEI NSEVRIRHML KAFNEAMEMG  180
QRKLEEVIMR FLAEKVNPLG QSLERLAFYL CLGFVDNQQG DYLKQESFKN FEDAFNMFYQ  240
IFPFGRFAHY AANTAILEAV PEDVETVHVV EFDIGEGVQL PQLIEAVAKR NKTLKVTAIK  300
WDVEESDEVA PPQWRFEETK RQLQHHAXSF GLNLKVEEIX IEDLVSXIKK XNKRGGXREF  360
LAFNSMVGLP HMRRRRSRGL LMEFLRLAKD LLTNSARGII TFGDGDAYAR RGNDSSFISF  420
FDANVVHYEA LLGSLESSFP SHLGEARMVM ELMFVAPYVS SQAWFEKWNE AREAGNLHPW  480
FGLEGRRVSR EMLMEAKEIV GADSSYGVRV GGENGNEMTL EWNSIPLIRV ETWTNRS*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.45012e-73fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009337756.20.0PREDICTED: nodulation-signaling pathway 2 protein-like
TrEMBLA0A498IEP80.0A0A498IEP8_MALDO; Uncharacterized protein
STRINGXP_008366908.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42742761
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-20RGA-like 1