PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000655666
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 443aa    MW: 50494.5 Da    PI: 6.2457
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000655666genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.42.4e-2231411128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykv.ePwdLpkkvkaeek.......ewyfFskrdkkyatgkrknratksgy.Wka 85 
                    lp+G+rF Ptdeel+ +yL++kv+gk+++ +    + ++d+y v ePwd+ +k+k++++       ++y F++ + k+++g+r  r+  sg  W+ 
  MDP0000655666   3 LPAGYRFCPTDEELILYYLQPKVNGKEVPGQGNspVFDFDLYGVmEPWDIWEKFKTKREndlklsnDLYCFTTLKLKTTEGTRICRTLPSGSkWNG 98 
                    799************************776543348899999866*****754433222223344477******************8887766*** PP

            NAM  86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  e++++ ++ ++g kk + + k+  ++ ++ +W+m e+ +
  MDP0000655666  99 ENRPSEIKNSgSEDVIGHKKRFSYSKN-GSDDQQDRWIMYEFDI 141
                    ********99556679*******9965.555589*******976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-231162IPR003441NAC domain
PROSITE profilePS5100527.4823163IPR003441NAC domain
PfamPF023655.9E-154140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MNLPAGYRFC PTDEELILYY LQPKVNGKEV PGQGNSPVFD FDLYGVMEPW DIWEKFKTKR  60
ENDLKLSNDL YCFTTLKLKT TEGTRICRTL PSGSKWNGEN RPSEIKNSGS EDVIGHKKRF  120
SYSKNGSDDQ QDRWIMYEFD IDQKLVLEPK QENKIVLCML RKKVNGSEKK RKHGDLEEEE  180
MLGDNNMDIS NGDSNYGDLD RKQVVPLETQ EKQQCFLPNN AGYLIPQVQR PEVYDPLQKF  240
HPQSIVYNVV HPQTPLQLEQ VDFHGKRNWG LQHLHQGEET WKHKLLKTFI SKNIQGRASG  300
SEQKALQREE SREYQSFMSC VDNVQALGAD PEQSALPKEV NWRKQCSMPC LDSALHQAGE  360
NHQVQQSSQD NVANGSLINN NIPHCTKPVP PYGLTIDQVD HAGSGNVYGG FGAANNDDFA  420
YTPWIKSFAN ELLRTNCSSK FN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009342921.10.0PREDICTED: uncharacterized protein LOC103934887
TrEMBLA0A498IPN40.0A0A498IPN4_MALDO; Uncharacterized protein
STRINGXP_009342921.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-16vascular related NAC-domain protein 7