PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000611751

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

SAP

Protein Properties

Length: 401aa MW: 45313.3 Da PI: 7.185

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000611751	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	586.6	6.7e-179	23	398	69	454
SAP 69 aasala..nvfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdky 162 aa l+ + vcstwravsrsdllw+rltrriW rt llrd Wr+ey+y+hrta+nfrtrr++++tl+fdp+dv++ +d l+Crcl+lsd + MDP0000611751 23 AAXXLFrxSLTDVCSTWRAVSRSDLLWRRLTRRIWGRTILLRDRWRDEYVYWHRTATNFRTRRSTHTTLHFDPSDVED---PDGLTCRCLTLSDAH 115 555554224678************************************************************8887...689******** PP SAP 163 laaGfadGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwv 258 l +GfadG+vrlf+ +trlhvstf+p+ rdrlGrfsrav+Givi+d+ l+fa ldGdihva+i+g +rra+lGdvvndG+lvdf+Gs+rWwv MDP0000611751 116 LXCGFADGTVRLFNXATRLHVSTFRPHPRDRLGRFSRAVTGIVITDTXLTFALLDGDIHVAIING--PQITRRAHLGDVVNDGVLVDFTGSERWWV 209 *************************************************************..679********************** PP SAP 259 GlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasn 354 GlyaGvpGrafhiWd+ te+l+fvGG+ltdPeavmGWhmlte+te+vGrvrvt++etavaCts+ r++ v ++ ee rrG+iv++ d+s MDP0000611751 210 GLYAGVPGRAFHIWDCLTEQLTFVGGTLTDPEAVMGWHMLTEMTEFVGRVRVTSHETAVACTSV-------RESRVCVEREEYRRGIIVTAADVSR 298 **********************************************************96.......5788888889999******** PP SAP 355 eayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihl 449 a+v+v +rG a+vrr ++leevcrf+v + +q v+gC+n yal+++ggv+rvWe e+ + ylys+ e ++evna+v d+rhva++s +t+hl MDP0000611751 299 TAFVIVGRRGLASVRRTDTLEEVCRFSVXRaSQMAVMGCMNEXYALMCGGGVVRVWEGERGA-YLYSFMEMIEEVNAFVCDERHVAACSGGTTLHL 393 ************************99899**********************977.***************************** PP SAP 450 ldfga 454 +dfga MDP0000611751 394 WDFGA 398 **8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.1280.50	1.7E-5	16	91	No hit	No description
SuperFamily	SSF81383	3.92E-8	32	76	IPR001810	F-box domain
SuperFamily	SSF50978	1.56E-12	102	238	IPR017986	WD40-repeat-containing domain
Gene3D	G3DSA:2.130.10.10	8.6E-4	105	179	IPR015943	WD40/YVTN repeat-like-containing domain
Gene3D	G3DSA:2.130.10.10	6.4E-6	218	396	IPR015943	WD40/YVTN repeat-like-containing domain
SuperFamily	SSF50978	1.56E-12	286	395	IPR017986	WD40-repeat-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MXESSEGGRE MRDLQTKIVH HTAAXXLFRX SLTDVCSTWR AVSRSDLLWR RLTRRIWGRT 60 ILLRDRWRDE YVYWHRTATN FRTRRSTHTT LHFDPSDVED PDGLTCRCLT LSDAHLXCGF 120 ADGTVRLFNX ATRLHVSTFR PHPRDRLGRF SRAVTGIVIT DTXLTFALLD GDIHVAIING 180 PQITRRAHLG DVVNDGVLVD FTGSERWWVG LYAGVPGRAF HIWDCLTEQL TFVGGTLTDP 240 EAVMGWHMLT EMTEFVGRVR VTSHETAVAC TSVRESRVCV EREEYRRGII VTAADVSRTA 300 FVIVGRRGLA SVRRTDTLEE VCRFSVXRAS QMAVMGCMNE XYALMCGGGV VRVWEGERGA 360 YLYSFMEMIE EVNAFVCDER HVAACSGGTT LHLWDFGAAD *

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MXESSEGGRE MRDLQTKIVH HTAAXXLFRX SLTDVCSTWR AVSRSDLLWR RLTRRIWGRT  60
ILLRDRWRDE YVYWHRTATN FRTRRSTHTT LHFDPSDVED PDGLTCRCLT LSDAHLXCGF  120
ADGTVRLFNX ATRLHVSTFR PHPRDRLGRF SRAVTGIVIT DTXLTFALLD GDIHVAIING  180
PQITRRAHLG DVVNDGVLVD FTGSERWWVG LYAGVPGRAF HIWDCLTEQL TFVGGTLTDP  240
EAVMGWHMLT EMTEFVGRVR VTSHETAVAC TSVRESRVCV EREEYRRGII VTAADVSRTA  300
FVIVGRRGLA SVRRTDTLEE VCRFSVXRAS QMAVMGCMNE XYALMCGGGV VRVWEGERGA  360
YLYSFMEMIE EVNAFVCDER HVAACSGGTT LHLWDFGAAD *

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028963350.1	0.0	transcriptional regulator STERILE APETALA-like
Swissprot	Q9FKH1	1e-160	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A498J5W4	0.0	A0A498J5W4_MALDO; Uncharacterized protein
STRING	XP_008365594.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7687	31	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	1e-138	SAP family protein

Link Out ? help Back to Top
Phytozome	MDP0000611751

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]