PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000573178
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 385aa    MW: 42501.1 Da    PI: 8.0853
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000573178genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.65.9e-103293691055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    r+RR+riN+++ +L+ l+P+      +K++ +++Le+Av+Y++ Lq
  MDP0000573178 329 RKRRERINERLRTLQHLVPNG-----TKVDISTMLEEAVHYVNFLQ 369
                    9******************97.....8*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.20208.1E-6513148IPR029057Phosphoribosyltransferase-like
HamapMF_0000429.70814184IPR005764Adenine phosphoribosyl transferase
SuperFamilySSF532712.84E-3916149IPR029057Phosphoribosyltransferase-like
CDDcd062231.61E-2148147IPR000836Phosphoribosyltransferase domain
PfamPF001562.9E-1150147IPR000836Phosphoribosyltransferase domain
SuperFamilySSF474597.85E-13318376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.862319368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-11324374IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-11325374IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.80E-10328373No hitNo description
PfamPF000102.8E-7329369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006168Biological Processadenine salvage
GO:0009116Biological Processnucleoside metabolic process
GO:0005737Cellular Componentcytoplasm
GO:0003999Molecular Functionadenine phosphoribosyltransferase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MAAEDGQDLR LARISSAIRV IPNFPKPGIL FQDITTLLLD TKAFKDTIDL FVERYKDKEI  60
SVVAGVEARG FIFGPPIALA IGAKFVPLRK PKKLPGKVIS EEYSLEYGTD KIEMHVGAVE  120
AGERALIXDD LIATGGTLGA AIRLLEKWSL SDAWDLRTPA QDAQQLDKEV LVRDSWSFAS  180
FVPDFSNIVM HGSECXKEDS SSDSQPAVVS VPEKELRLKR VHDAPGKSNN DASNCNPKKK  240
PHISKDXEKS KKNNVRPKKG QKGNSNVKVK DEEERLESTS SCTSEDDNGS LEXNGAETSD  300
PKSSSALNLN GKTRANRGSA TDPQSLYARK RRERINERLR TLQHLVPNGT KVDISTMLEE  360
AVHYVNFLQL QIKHFTTLQF GITN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2dy0_A6e-481014914153Adenine phosphoribosyltransferase
2dy0_B6e-481014914153Adenine phosphoribosyltransferase
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.26400.0bud| cell culture| flower| fruit| leaf| root| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008393743.21e-134transcription factor bHLH85-like
TrEMBLA0A498HTP71e-133A0A498HTP7_MALDO; Uncharacterized protein
STRINGXP_008393740.11e-134(Malus domestica)
STRINGXP_008393743.11e-134(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.15e-30ROOT HAIR DEFECTIVE 6-LIKE 2