PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000512279

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

VOZ

Protein Properties

Length: 396aa MW: 44233.2 Da PI: 5.5522

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000512279	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	319	3.1e-98	146	351	1	209
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pp saf +pkcalw+c+rp++ +qd css ha+la neglpg tpvlrp+gi lkdg+lfaal+ k+qgk+vgip c+gaat +spw+ +elf MDP0000512279 146 PPASAFKRPKCALWECSRPVHV--LCQDXCSSGHAHLARNEGLPGKTPVLRPWGIALKDGSLFAALNDKTQGKDVGIPDCDGAATLRSPWDDPELF 239 789***************86..6******************************************************************* PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 dl l eget rewlff +prrafesgnrk+r l +y+gr wh sr q m e+gg+krsyymdpqpss ewhl+eye+n++da+alyrlelk + MDP0000512279 240 DLXLXEGETPREWLFFGRPRRAFESGNRKRRXLQNYRGR-WHVSRTQEMMEYGGQKRSYYMDPQPSSDREWHLFEYEVNNSDACALYRLELKFGTA 334 **********************************9.**************************************************** PP VOZ 193 kksakgkvskdsladlq 209 kks+kgk s+d++ l MDP0000512279 335 KKSSKGKQSNDPVGRLT 351 **********98775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.2E-5	242	325	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence Send to blast
MTKESKGKCE AASHKLLKEK AKTRVQKLRG MFTNIQIARK EGRTADMAIF EDQMDQMLGG 60 WIAELNDPSI ASSLHGGSDG RLESFSDDLA RFSKQQCDEK DDAESPLKDL PQPNLEGPEP 120 EGPPEDXFQD LEFPDVVPDV MPDICPPASA FKRPKCALWE CSRPVHVLCQ DXCSSGHAHL 180 ARNEGLPGKT PVLRPWGIAL KDGSLFAALN DKTQGKDVGI PDCDGAATLR SPWDDPELFD 240 LXLXEGETPR EWLFFGRPRR AFESGNRKRR XLQNYRGRWH VSRTQEMMEY GGQKRSYYMD 300 PQPSSDREWH LFEYEVNNSD ACALYRLELK FGTAKKSSKG KQSNDPVGRL TAEASTEVGN 360 NSKGTTSKNA EAGNIFGSDN QTNSLYLNPE MSWKC*

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence Send to blast

MTKESKGKCE AASHKLLKEK AKTRVQKLRG MFTNIQIARK EGRTADMAIF EDQMDQMLGG  60
WIAELNDPSI ASSLHGGSDG RLESFSDDLA RFSKQQCDEK DDAESPLKDL PQPNLEGPEP  120
EGPPEDXFQD LEFPDVVPDV MPDICPPASA FKRPKCALWE CSRPVHVLCQ DXCSSGHAHL  180
ARNEGLPGKT PVLRPWGIAL KDGSLFAALN DKTQGKDVGI PDCDGAATLR SPWDDPELFD  240
LXLXEGETPR EWLFFGRPRR AFESGNRKRR XLQNYRGRWH VSRTQEMMEY GGQKRSYYMD  300
PQPSSDREWH LFEYEVNNSD ACALYRLELK FGTAKKSSKG KQSNDPVGRL TAEASTEVGN  360
NSKGTTSKNA EAGNIFGSDN QTNSLYLNPE MSWKC*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.11208	0.0	bud

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009354289.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-94	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A498HCH3	0.0	A0A498HCH3_MALDO; Uncharacterized protein
STRING	XP_008353773.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	2e-89	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	MDP0000512279

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]