PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000446783
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 399aa    MW: 43848 Da    PI: 4.6656
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000446783genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-1879129155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    + y+GVr++  +g+WvAeIr+p     r  r +lg+f ta +Aa a+++a+k+++g
  MDP0000446783  79 CNYRGVRQRT-WGKWVAEIREPD----RgSRLWLGTFPTALDAALAYDEAAKAMYG 129
                    56*****999.**********82....34************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.87E-3079139No hitNo description
PfamPF008477.8E-1379129IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-2980138IPR001471AP2/ERF domain
SMARTSM003808.2E-3480143IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-1980138IPR016177DNA-binding domain
PROSITE profilePS5103221.23280137IPR001471AP2/ERF domain
PRINTSPR003672.9E-98192IPR001471AP2/ERF domain
PRINTSPR003672.9E-9103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MGAYDQGANM SSLPLDSSRK RKTRSRRDGN SVAETLEKWK EYNKKLESVN NEGKTRKVPA  60
KGSKKGCMKG KGGPENARCN YRGVRQRTWG KWVAEIREPD RGSRLWLGTF PTALDAALAY  120
DEAAKAMYGT GARLNLPHAA NYHPSSSLET SSVATPSGSS AVATPGCSTS TSTSSRSEIC  180
GDEDSKLFLN VKKEDGEGES RMYPWSTAVP QASGMVKPEI IEDFTMDYLR NXQQQPVVKP  240
EAGVEDHNWN GGEGFIGDYS ENFTTDELFD MDEMFDVNEL LMPSDDISLC NSGSEQVWRA  300
DVGQSGMETL SSERPSNLSY QLQFPDAKLL GSLQHMEHAP LNFEYGFDFK KQEKEGSNHT  360
GQDDQGYFNL GLSDLDLEGF TGGITQSGDG GYNYSMEM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-1880137260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11722SRKRKT
22027RKTRSRRD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.302130.0bud| fruit
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ7905260.0JQ790526.1 Malus sieversii DREB2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008354169.20.0LOW QUALITY PROTEIN: dehydration-responsive element-binding protein 2A
TrEMBLA0A498KNR40.0A0A498KNR4_MALDO; Uncharacterized protein
STRINGXP_008354169.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117534106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.12e-43DRE-binding protein 2A