PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000442215 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | ERF | ||||||||
Protein Properties | Length: 328aa MW: 35687.6 Da PI: 7.8537 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.1 | 1.2e-14 | 171 | 219 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 + kGVr++k +g+Wv+eIr+p + r r +lg+f tae Aa a++ +l+ MDP0000442215 171 KLKGVRQRK-WGKWVSEIRVPGT---RDRLWLGTFSTAEAAAVARDVGYYCLR 219 679*****9.**********943...5*****************998888777 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.81E-23 | 171 | 230 | No hit | No description |
SuperFamily | SSF54171 | 1.44E-15 | 171 | 231 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 19.73 | 171 | 230 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.8E-23 | 171 | 236 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.4E-7 | 171 | 208 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.3E-8 | 172 | 183 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-22 | 172 | 230 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.3E-8 | 194 | 210 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MXTLVFYTQL DLXCHGDSAS SKKSGPHSVS STALDVLKLV WVLDATPGIV RPGRDGEDHP 60 EVLISVLSTL PNEWVVTNLR PTNSLGSSPS TFSWVFDLKG IXEMKIVEDV PRGVHVNFLK 120 AERSLHGWAL GISREFMRLR KQVEWKCMSL RMQATGSEES GSPPCSTSNR KLKGVRQRKW 180 GKWVSEIRVP GTRDRLWLGT FSTAEAAAVA RDVGYYCLRR PSTLEGLNFP LRLPSCVRDD 240 MSPRSVQKAA SDAGMAVDAQ LIANKSPPPQ PAGTGSNAVE TTEFRENGYM GETSTSTSMS 300 SWGGGHGFGN GGDHQGCLSI SVEDYDL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028963124.1 | 1e-122 | ethylene-responsive transcription factor ERF019-like | ||||
TrEMBL | A0A498JGG8 | 1e-121 | A0A498JGG8_MALDO; Uncharacterized protein | ||||
STRING | XP_009335462.1 | 1e-96 | (Pyrus x bretschneideri) | ||||
STRING | XP_009378898.1 | 1e-96 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5489 | 30 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 1e-42 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000442215 |