PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000431572
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 347aa    MW: 37621.8 Da    PI: 4.687
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000431572genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.8e-14177228357
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                    ++kr rr+ +NRe+ArrsR+RK+a ++eLe  +++L  eN++L  +l    + ++
  MDP0000431572 177 DIKRIRRMVSNRESARRSRRRKQAHLAELELQAEQLRRENSTLCXQLT---DASQ 228
                    58*****************************************95554...4443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-13175239IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-10177231No hitNo description
PROSITE profilePS5021710.99177240IPR004827Basic-leucine zipper domain
PfamPF001702.0E-10178224IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-10179229No hitNo description
CDDcd147021.23E-7180231No hitNo description
PROSITE patternPS000360182197IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MEQXPACDVS VHSQTASSPF ELKREFSLGE ALEYLMDKSM IGQEGADTQG HQXEKMDEYW  60
AKYRNFASAD VFXGDVCAGD LSFAFKNEDI MDGFSSFGEL TETLLCTQNL TPKNSCISAT  120
MDSQSSICVG CPTSAAKPIG RDNQARGAYS GSSGEQSDED DFEMEFGPCG DSTDPLDIKR  180
IRRMVSNRES ARRSRRRKQA HLAELELQAE QLRRENSTLC XQLTDASQQF RDADTNNRVL  240
KSDVEALKAK VKLAEDLVAR VSITSSLNQI LQGHLGTPQP LNPHNVRGVA AHVSPTITVH  300
GQDAPYAGIA VSGQNAGLGL GNAGMANSNL SNLMMSDTVS CVSDMW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191198RRSRRRKQ
2193198SRRRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.113240.0bud| fruit| leaf| root
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Present in silique vasculature and funiculi. In the anthers, restricted to the connective tissue at pre- and post-dehiscence stages and detected in the vascular tissue of the stamen filament. {ECO:0000269|PubMed:18841482}.
UniprotTISSUE SPECIFICITY: Expressed in roots, shoots, stems, young leaves, and flowers, mostly in vascular tissues (e.g. phloem). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:18841482}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008367702.20.0basic leucine zipper 9-like
SwissprotQ9FUD34e-66BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A498J9R40.0A0A498J9R4_MALDO; Uncharacterized protein
STRINGXP_008351367.10.0(Malus domestica)
STRINGXP_008360476.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-41basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]