PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000321049
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 449aa    MW: 50828.9 Da    PI: 5.8729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000321049genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-14182233155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++++k+L+
  MDP0000321049 182 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 233
                    79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-16172244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.73E-14180237No hitNo description
PROSITE profilePS5088815.777181232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-14182245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-11182233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-11187238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MVLQQFFGEH LDFPFEQSLN FTTEXLRFEE EEESXHPHLS LPSLDDRMPF LQMLQSVDSS  60
TTTTTPYFPL KEPSFQALLK LQHFKXPWEL DKNYMPEMET PIQKALELES CVTHAMVELQ  120
HSPVKSEGKD SHLHHSISEC NQGEEKPSSV AGFXHHHLPG FRERRKRKRT RPTKNKEEVE  180
SQRMTHIAVE RNRRRQMNDH LNVLRSLMPT SYIQRGDQAS IVGGAIDFVK ELEQLLHSLE  240
AQKRTRKAAD QIQGMSNIGD NNSSFSSSSA SSSSPCSMAM PSNGMFMSLS QCRIGSHDQE  300
STTATFDDEG TAQNKSEAAD IDVTVIQSHV NLKVKCQRRA GQLMXAIVAL EDLRLTVLHL  360
NITSSQDTVL YSFNLEIEEG CNLGSADGIA KAVHQIFSFI NGFWGPLHIE YLDPIIXNFE  420
MEASLSIFDF GRPMCIWGAS SLYMLYACP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168RRKRKR
2182193RMTHIAVERNRR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.166785e-92fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028955608.10.0transcription factor bHLH57 isoform X1
TrEMBLA0A498KPJ10.0A0A498KPJ1_MALDO; Uncharacterized protein
STRINGXP_008358042.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.11e-73bHLH family protein