PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000319194
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 872aa    MW: 97245.9 Da    PI: 9.1142
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000319194genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.35.9e-112182541655
            AP2  16 vAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  MDP0000319194 218 RAEIRDpF-----KaARVWLGTFETAEAAAQAYDQAALRFRG 254
                    69****66.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.858196262IPR001471AP2/ERF domain
SMARTSM003801.5E-16206268IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-13218263IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.3E-20219263IPR001471AP2/ERF domain
PfamPF008473.2E-5225254IPR001471AP2/ERF domain
PfamPF030046.5E-21517643IPR004252Probable transposase, Ptta/En/Spm, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 872 aa     Download sequence    Send to blast
MSPIANIVLL IQTKGVLKRF GRCRFKATSX KSPCLVVGRV RFLDERELAL LKVANSRGNN  60
DQRADGQGGQ RGRGGAGSGI LVSATSSMLL HLDREREMSV MVSALTHVVA GDDDEVAAAA  120
PACGNSDSGT SSWGSVGTKR GREEEEGGSG RGGAPLFESV IRLCRTFGEF PQQIQRTSSA  180
FGGNXILTFX ISQDRMTCGA NEEKIQRSET KAVGANGRAE IRDPFKAARV WLGTFETAEA  240
AAQAYDQAAL RFRGNKAKLN FPENVRLLLS TAVAPPTQLT HSAPQNTLLS VATSTESIVH  300
SHAFHSSEEV VDALFIEVFT FQGWMANLML DDDAFLASVE TQPHSPFGVV AQNDSFATNQ  360
PHATCSGNAL SSGSTSLSAT TRKKNRGVNR IRWGRGRREK LNFNKYGQAI SPRDNVARYG  420
RYIAMLARDX GLIPIDSPDW RKLDSSKLDR VWSLVQATID WTNPRAAGKE EKVKGIVETK  480
IHDRFRTWRG KLRKLYYVPF ENSEQRKHCN DARVIQTQWQ ALVAQWDKME NKRRCATNAK  540
NRKMLKTSHT TGTTTFAQIR NDYAEEHDGN EPDRVTFFKM THTRGPKQLP VDDESGRMML  600
AFENLEVEVC ERGEEITTEI RNRIFAEVMG PEKRNHVRGF GLGVGWADVP GIITEQRGIS  660
REVKYLREAY EAQKQVTAAA EEKMTRMMHE ANEKAEKMKK EQEESIQRLR AEQEENLRLA  720
KVQMAEQLKA MLAHVGINIG SFGVGALQST STQQQGCGSS HPQISTLFEG GNDKNVQCGP  780
PVSSAMMHED CQSENADSHR DEQGHQRHCI XRLRGHLRRQ NDGGSPFRLQ LRKMLPHRAL  840
LPAGEYGQEV RHEEEGGRDX QDVEEVRRLH QR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.24286e-90fruit| leaf| stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498JFY40.0A0A498JFY4_MALDO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.12e-18ERF family protein