PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000300382
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 233aa    MW: 26619.3 Da    PI: 8.7421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000300382genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.84e-11108149351
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  MDP0000300382 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 149
                    79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.5E-4107164IPR001471AP2/ERF domain
PfamPF008471.9E-5107150IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-7108152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.4E-6110154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MVSLRRXRLL GLGLCCEIPP VLDPLPRVXN NGTTPQNFTR ANPVSVHPMP ANDAYQPDGN  60
TIVKAEFRSS TASGCSLSKE QHDVAGPPIK RRKRHRRKHA QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA AHLYDRAAFM CGREPNFELS EEEKKELRKF KWDEFLAMTR  180
HAITNKKHRR RSGAESEKRS ESPQLEDANW EDXKEEVNVL SASEDAEQDM LDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008372497.31e-173ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_017187578.21e-173ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A498JXZ51e-139A0A498JXZ5_MALDO; Uncharacterized protein
STRINGXP_008356228.11e-173(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-40ERF family protein