PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000298677
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 267aa    MW: 29799.8 Da    PI: 6.0558
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000298677genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.15.7e-101051441355
            AP2  13 grWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    g+W+AeIrd       r  r++lg+f taeeA   +++a+ +++g
  MDP0000298677 105 GKWAAEIRDlH-----RgVRVWLGTFETAEEAGMPYDRAAIAFKG 144
                    8********77.....56*********************999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.21292152IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-18104151IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-14104151IPR016177DNA-binding domain
CDDcd000182.24E-21105151No hitNo description
PfamPF008471.1E-4105144IPR001471AP2/ERF domain
SMARTSM003807.5E-19105158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MDGPKQRTQS RTVISKLVKT LTTHFRESNA SGAPKIVWIF VTDDNATDSS GDEAEPSPSR  60
KHWVLVKRVI NEVRIEDYSS QTMLLPTEGS EVQSGGEERT AEAVGKWAAE IRDLHRGVRV  120
WLGTFETAEE AGMPYDRAAI AFKGPLALTN FLKPPENVIP DNSDVDCSQS PHNSDGSHCV  180
RSPTSVLSGR DAEIVRKPVV GVSERQNFGA FDTDFWLKDC FEPPICFDEM RVVPETLLKM  240
RISPIYRSIS GRVIGMTWRI TFKVLMS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009350189.11e-139PREDICTED: ethylene-responsive transcription factor ERF069-like
TrEMBLD5L1041e-101D5L104_MALDO; AP2 domain class transcription factor
STRINGXP_009350189.11e-138(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-28cytokinin response factor 4