PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000289945
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 383aa    MW: 42026.3 Da    PI: 6.7093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000289945genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.6e-19225274255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a++k++g
  MDP0000289945 225 HYRGVRRRP-SGKWAAEIRDPV----KaARVWLGTFDTAEAAALAYDKAALKFKG 274
                    69*******.7*********64....55************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.98E-22224283No hitNo description
SuperFamilySSF541715.43E-21225283IPR016177DNA-binding domain
PROSITE profilePS5103223.947225282IPR001471AP2/ERF domain
SMARTSM003801.3E-35225288IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-30225283IPR001471AP2/ERF domain
PfamPF008471.1E-12225274IPR001471AP2/ERF domain
PRINTSPR003672.1E-9226237IPR001471AP2/ERF domain
PRINTSPR003672.1E-9248264IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MAPESTTTAM LKDRSVNQSF DQQVSLPRVS SRSSYARSMF CTGGCLCGGE LQFLEVMEVL  60
KSSSNLCCNS NEEEMASLGS TEPQSGPYVD DAGGSHVEED DRFPGSKVVM SEFQDGEALS  120
ESGRYRRLHI HKVDRKHGKR PLASVESEEK EEDQIFPVYP TRSQQDTSAM VSALAQVIGK  180
NSDQINNPLG QVQGINPLTT SQSSPTETQS QPVLLQDQGN LRRQHYRGVR RRPSGKWAAE  240
IRDPVKAARV WLGTFDTAEA AALAYDKAAL KFKGSKAKXN FPERVQGSSE SGCLTLITTD  300
QQDSLNINPP QPNITRPTSS SVFDCTQHNN VIYCTSLLSS SSMPSQQAAE LPSFSMQFGS  360
SFSSSSSGPP HKYRKDFDSR HSR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-24224285163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017188818.21e-155ethylene-responsive transcription factor ERF113-like
TrEMBLA0A498JM390.0A0A498JM39_MALDO; Uncharacterized protein
STRINGXP_008375520.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.14e-35ERF family protein