PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000265416
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 339aa    MW: 38168.8 Da    PI: 5.2764
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000265416genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.91.5e-13101533128
            NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk..s 80 
                      frF+Ptd+el+ ++L+  + +++      + + ++++++++  ++eP+++ +        ++ a ++  +yfFs+  k +++g++  r++    
  MDP0000265416  10 SFFRFKPTDQELIGRFLRYFLVETPrllppPPHHXFMHKCNLFgnHSEPSEIWEafggggalQLXAADQpALYFFSELTKXTPKGSNIARKMGrnG 105
                    569****************99999889887555567****98622679****74478888774444444488**************9999654348 PP

            NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    g W  +     v  +  +++ +glk+t+ + +  +++  +  W+++ey+l
  MDP0000265416 106 GKWDGKAVPAWVEGTdgTSTCIGLKRTFCYKNVCSED--HGAWLLDEYSL 153
                    99*988888888776545566*********9665555..89*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-168178IPR003441NAC domain
PROSITE profilePS5100520.9658178IPR003441NAC domain
PfamPF023652.2E-1110153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MEINHSLVPS FFRFKPTDQE LIGRFLRYFL VETPRLLPPP PHHXFMHKCN LFGNHSEPSE  60
IWEAFGGGGA LQLXAADQPA LYFFSELTKX TPKGSNIARK MGRNGGKWDG KAVPAWVEGT  120
DGTSTCIGLK RTFCYKNVCS EDHGAWLLDE YSLFAAPRKX KSHTSYDFDY VLCRLRKTSD  180
NNKRKCXTSS SSEDDQVTAL KKNDINKRKC PXSSSSEDQV TTSNKRTKKK SANEEIEGDN  240
DQXLPLPADS GIAADGAVEE NVWDPSLLEK YLLETHEEEP LNPSFYSEWI AADGGVQEAY  300
HPNAYENVLN QSYYSSSYPN NACLEDQFMP PVNIAQEIL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009343318.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A498KEC14e-75A0A498KEC1_MALDO; Uncharacterized protein
STRINGXP_009343318.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2762223
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.27e-06NAC domain containing protein 38