PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000245114

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

SAP

Protein Properties

Length: 155aa MW: 16964.5 Da PI: 7.715

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000245114	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	205	4e-63	1	153	301	454
SAP 301 ltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvng 395 +te+vGrvrvt+retavaCts r++vfdlrnqg+vl ee rrG+iv++ d+s +ay++v +rG a+vr ++leevcrf+vrg aq v+gC+n MDP0000245114 1 MTEAVGRVRVTSRETAVACTSARVIVFDLRNQGIVLS-EEYRRGIIVGAADVSRSAYIIVGRRGLASVRWSDTLEEVCRFNVRGaAQMAVMGCMNE 95 689*******************************9.7899**************************************99****** PP SAP 396 gyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454 g al++ ggv+rvWe+e+ + ylys+rer+gevnalv d+rhva++s + +hl+dfga MDP0000245114 96 GCALMCVGGVVRVWEVERGA-YLYSFRERIGEVNALVCDERHVAACSGGTRLHLWDFGA 153 **************77.***********************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF50978	2.93E-8	16	150	IPR017986	WD40-repeat-containing domain
Gene3D	G3DSA:2.130.10.10	8.0E-7	53	151	IPR015943	WD40/YVTN repeat-like-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence Send to blast
MTEAVGRVRV TSRETAVACT SARVIVFDLR NQGIVLSEEY RRGIIVGAAD VSRSAYIIVG 60 RRGLASVRWS DTLEEVCRFN VRGAAQMAVM GCMNEGCALM CVGGVVRVWE VERGAYLYSF 120 RERIGEVNAL VCDERHVAAC SGGTRLHLWD FGAAD

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028953353.1	1e-104	transcriptional regulator STERILE APETALA-like
Swissprot	Q9FKH1	3e-51	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A498H913	1e-102	A0A498H913_MALDO; Uncharacterized protein
STRING	XP_008347820.1	1e-105	(Malus domestica)
STRING	XP_008365241.1	1e-101	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7687	31	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	6e-43	SAP family protein

Link Out ? help Back to Top
Phytozome	MDP0000245114

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]