PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000226099
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 330aa    MW: 36091.3 Da    PI: 8.2403
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000226099genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78.2e-20190239255
            AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  MDP0000226099 190 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAAQAYDQAALRFRG 239
                    7********.**********66.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103225.396190247IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-32190248IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-22190248IPR016177DNA-binding domain
SMARTSM003802.3E-35190253IPR001471AP2/ERF domain
PfamPF008472.1E-13190239IPR001471AP2/ERF domain
PRINTSPR003672.1E-11191202IPR001471AP2/ERF domain
CDDcd000188.11E-15198249No hitNo description
PRINTSPR003672.1E-11213229IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MCVLKVANSR GNNDQRAARR TNIEEGQGGH HNIGEWLNEP PLISHQQRQR AGGGGSGILA  60
SAASSMLLXL DREREMSAMV SALTHVVAGD ENEVAAAGVN SDSRTSSWGS VGTKRRREEE  120
EEGGGGGGPL SESVTRLCRA FDEFPXHILG PSSAFGEGLX TRTTTTAIPP TPSNRYVYSA  180
PEIAEPIRRR YRGVRQRPWG KWAAEIRDPF KAARVWLGTF ETAEAAAQAY DQAALRFRGN  240
KAKLNFPENV RLLSSTAVPP PTQLSNSAPQ NTLLSVATSS EPIVHSQAFH SSDEVPSTSR  300
NLVSYSELVD MQRQPMSIYY QMQWRSQNSE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-23189250466ATERF1
3gcc_A4e-23189250466ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028950710.10.0ethylene-responsive transcription factor ABR1-like
TrEMBLA0A498I0G10.0A0A498I0G1_MALDO; Uncharacterized protein
STRINGXP_008353572.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.16e-29ethylene response factor 110