PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000222000

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

SAP

Protein Properties

Length: 474aa MW: 53814.2 Da PI: 8.5898

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000222000	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	262.6	1.3e-80	138	298	77	242
SAP 77 fqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGav 172 qvcstwravsrsdllw+rltrriW rt llrd Wr+ey+y+hrta+nfrtrr++++tl+fdp+dv++ +d l+Crcl+lsd +l +GfadG+v MDP0000222000 138 VQVCSTWRAVSRSDLLWRRLTRRIWGRTILLRDRWRDEYVYWHRTATNFRTRRSTHTTLHFDPSDVED---PDGLTCRCLTLSDAHLXCGFADGTV 230 489***********************************************************8887...689****************** PP SAP 173 rlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvv 242 rlf+ +trlhvstf+p+ rdrlGrfsrav+Givi+d+ l+fa ldGdihva+i+g +rra+lGdv+ MDP0000222000 231 RLFNXATRLHVSTFRPHPRDRLGRFSRAVTGIVITDTXLTFALLDGDIHVAIING--PQITRRAHLGDVL 298 ***************************************************..679******97 PP
2	SAP	249.6	1.1e-76	298	472	279	454
SAP 279 lvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenl 374 l+fvGG+ltdPeavmGWhmlte+te+vGrvrvt++etavaCts+r++vfdlrnqg vl ee rrG+iv++ d+s a+v+v +rG a+vrr ++l MDP0000222000 298 LTFVGGTLTDPEAVMGWHMLTEMTEFVGRVRVTSHETAVACTSVRVIVFDLRNQGFVLS-EEYRRGIIVTAADVSRTAFVIVGRRGLASVRRTDTL 392 69******************************************************9.7899**************************** PP SAP 375 eevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454 eevcrf+v + +q v+gC+n yal+++ggv+rvWe e+ + ylys+ e ++evna+v d+rhva++s +t+hl+dfga MDP0000222000 393 EEVCRFSVXRaSQMAVMGCMNEXYALMCGGGVVRVWEGERGA-YLYSFMEMIEEVNAFVCDERHVAACSGGTTLHLWDFGA 472 ****99899**********************977.***********************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.1280.50	3.5E-6	139	196	No hit	No description
SuperFamily	SSF81383	5.67E-8	139	188	IPR001810	F-box domain
SuperFamily	SSF50978	8.24E-13	206	470	IPR017986	WD40-repeat-containing domain
Gene3D	G3DSA:2.130.10.10	5.6E-10	208	470	IPR015943	WD40/YVTN repeat-like-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
MSFPPYSSLT LPGSYSYDVI CNEKERXMRE SSEGGREMRD LQTKIVHHTA ATSLFRPSLT 60 DVFSXSLFSY TPRLLFYYYV LSIGLHLLGP LSLSLSRVYA HGFNCLLRGA RVLHLLLFSP 120 RCNLLLLKLI AYVTFFRVQV CSTWRAVSRS DLLWRRLTRR IWGRTILLRD RWRDEYVYWH 180 RTATNFRTRR STHTTLHFDP SDVEDPDGLT CRCLTLSDAH LXCGFADGTV RLFNXATRLH 240 VSTFRPHPRD RLGRFSRAVT GIVITDTXLT FALLDGDIHV AIINGPQITR RAHLGDVLTF 300 VGGTLTDPEA VMGWHMLTEM TEFVGRVRVT SHETAVACTS VRVIVFDLRN QGFVLSEEYR 360 RGIIVTAADV SRTAFVIVGR RGLASVRRTD TLEEVCRFSV XRASQMAVMG CMNEXYALMC 420 GGGVVRVWEG ERGAYLYSFM EMIEEVNAFV CDERHVAACS GGTTLHLWDF GAAD

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

MSFPPYSSLT LPGSYSYDVI CNEKERXMRE SSEGGREMRD LQTKIVHHTA ATSLFRPSLT  60
DVFSXSLFSY TPRLLFYYYV LSIGLHLLGP LSLSLSRVYA HGFNCLLRGA RVLHLLLFSP  120
RCNLLLLKLI AYVTFFRVQV CSTWRAVSRS DLLWRRLTRR IWGRTILLRD RWRDEYVYWH  180
RTATNFRTRR STHTTLHFDP SDVEDPDGLT CRCLTLSDAH LXCGFADGTV RLFNXATRLH  240
VSTFRPHPRD RLGRFSRAVT GIVITDTXLT FALLDGDIHV AIINGPQITR RAHLGDVLTF  300
VGGTLTDPEA VMGWHMLTEM TEFVGRVRVT SHETAVACTS VRVIVFDLRN QGFVLSEEYR  360
RGIIVTAADV SRTAFVIVGR RGLASVRRTD TLEEVCRFSV XRASQMAVMG CMNEXYALMC  420
GGGVVRVWEG ERGAYLYSFM EMIEEVNAFV CDERHVAACS GGTTLHLWDF GAAD

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028963350.1	0.0	transcriptional regulator STERILE APETALA-like
Swissprot	Q9FKH1	1e-135	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A498J5W4	0.0	A0A498J5W4_MALDO; Uncharacterized protein
STRING	XP_008348314.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7687	31	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	1e-127	SAP family protein

Link Out ? help Back to Top
Phytozome	MDP0000222000

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]