PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000195431

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

VOZ

Protein Properties

Length: 346aa MW: 38301.1 Da PI: 5.7573

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000195431	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	188.3	3e-58	153	277	1	127
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pp saf +pkcalw+c+rp++ +qd css ha+la neglpg tpvlrp+gi lkdg+lfaal+ k+qgk+vgip c+gaat +spw+ +elf MDP0000195431 153 PPASAFKRPKCALWECSRPVHV--LCQDXCSSGHAHLARNEGLPGKTPVLRPWGIALKDGSLFAALNDKTQGKDVGIPDCDGAATLRSPWDDPELF 246 789***************86..6******************************************************************* PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqr 127 dl l eget rewlff +prrafesgnrk+r MDP0000195431 247 DLFLHEGETPREWLFFGRPRRAFESGNRKRR 277 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MTKESKGKCE AASHKLLKEK AKTRVQKLRG MFTNIQIARK EGRTADMAIF EDQMDQMLGG 60 WIAELNDPSI ASSLHGGSXG RLESFSDDLA RFSKQQCDEK DDAESPLKDL PQPNLEGPEP 120 EDFIVSFKGP PEDXFQDLEF PDVVPDVMPD ICPPASAFKR PKCALWECSR PVHVLCQDXC 180 SSGHAHLARN EGLPGKTPVL RPWGIALKDG SLFAALNDKT QGKDVGIPDC DGAATLRSPW 240 DDPELFDLFL HEGETPREWL FFGRPRRAFE SGNRKRRLEL KFGTAKKSSK GKQSNDPVGR 300 LTAEASTEVG NNSKXTTSKN AEAGNIFGSD NQTNSLYLNP EMSWKC

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MTKESKGKCE AASHKLLKEK AKTRVQKLRG MFTNIQIARK EGRTADMAIF EDQMDQMLGG  60
WIAELNDPSI ASSLHGGSXG RLESFSDDLA RFSKQQCDEK DDAESPLKDL PQPNLEGPEP  120
EDFIVSFKGP PEDXFQDLEF PDVVPDVMPD ICPPASAFKR PKCALWECSR PVHVLCQDXC  180
SSGHAHLARN EGLPGKTPVL RPWGIALKDG SLFAALNDKT QGKDVGIPDC DGAATLRSPW  240
DDPELFDLFL HEGETPREWL FFGRPRRAFE SGNRKRRLEL KFGTAKKSSK GKQSNDPVGR  300
LTAEASTEVG NNSKXTTSKN AEAGNIFGSD NQTNSLYLNP EMSWKC

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.11208	1e-116	bud

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009354289.1	1e-160	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-81	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A498HCH3	0.0	A0A498HCH3_MALDO; Uncharacterized protein
STRING	XP_008342960.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	4e-84	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	MDP0000195431

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]